RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 SLC35F5Q8WV83 523 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 MCRS1Q96EZ8 462 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 SCYL1Q96KG9 808 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ZFYVE28Q9HCC9 887 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 XPOTO43592 962 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 MT-CYBP00156 380 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ITGAVP06756 1048 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 TPP2P29144 1249 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CHI3L2Q15782 390 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PPP1R15BQ5SWA1 713 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CERCAMQ5T4B2 595 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 KIAA0319Q5VV43 1072 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CDHR3Q6ZTQ4 885 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 SMG8Q8ND04 991 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 MCUQ8NE86 351 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 RNF139Q8WU17 664 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF317Q96PQ6 595 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 LHX5Q9H2C1 402 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 DTLQ9NZJ0 730 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 RABGEF1Q9UJ41 708 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 C3orf70A6NLC5 250 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PTGESO14684 152 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CD4P01730 458 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ERCC2P18074 760 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 SV2CQ496J9 727 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 SLC39A12Q504Y0 691 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 FYB2Q5VWT5 728 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 GIPC2Q8TF65 315 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 TRIB2Q92519 343 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 P2RY11Q96G91 374 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PRR11Q96HE9 360 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ROPN1BQ9BZX4 212 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-203ENST00000374429 ZFATQ9P243 1243 aa11.14□□□□□ -0.63
CXCL12-203ENST00000374429 A6NNZ2 444 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 NPR3P17342 541 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 NCF2P19878 526 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TAC1P20366 129 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 PAX3P23760 479 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 IL4RP24394 825 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CTGFP29279 349 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TYK2P29597 1187 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CCL23P55773 120 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 PEX6Q13608 980 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TBC1D25Q3MII6 688 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TUBB8Q3ZCM7 444 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TAF1BQ53T94 588 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 NUDCD3Q8IVD9 361 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 B4GALNT2Q8NHY0 566 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 HTR3CQ8WXA8 447 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ZNF75CPQ92670 426 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 HEY2Q9UBP5 337 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ZMPSTE24O75844 475 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ENO1P06733 434 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CPB1P15086 417 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 DNAJB2P25686 324 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 MGAT5BQ3V5L5 792 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 FBXO48Q5FWF7 155 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ANKRD20A2Q5SQ80 823 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ANKRD20A1Q5TYW2 823 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 NXNQ6DKJ4 435 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CYB5D1Q6P9G0 228 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ARHGAP36Q6ZRI8 547 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 POU5F2Q8N7G0 328 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CMASQ8NFW8 434 aaPredicted RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 WDR83Q9BRX9 315 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 SPON2Q9BUD6 331 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 MAN1C1Q9NR34 630 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 GOLGA8QA0A0J9YX86 632 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 GOLGA8OA6NCC3 632 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 GOLGA8NF8WBI6 632 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ALOX15BO15296 676 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 STK10O94804 968 aaKnown RBP11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CSH1P0DML2 217 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 CSH2P0DML3 217 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 GNAT1P11488 350 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 AKR1A1P14550 325 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 ALDH3A1P30838 453 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 L1CAMP32004 1257 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 PGFP49763 221 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 SNCBQ16143 134 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 LRRC36Q1X8D7 754 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 RGMBQ6NW40 437 aa11.13□□□□□ -0.63
CXCL12-203ENST00000374429 LDB1Q86U70 411 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms