RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 PDCD6IPQ8WUM4 868 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 RMND5BQ96G75 393 aaPredicted RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 CSRNP1Q96S65 589 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 RSAD1Q9HA92 442 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 PICK1Q9NRD5 415 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 ZNF277Q9NRM2 450 aaPredicted RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 EPS15L1Q9UBC2 864 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 RGSL1A5PLK6 1076 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 DCXO43602 365 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 RAD17O75943 681 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 ESRRBO95718 433 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 PDGFRBP09619 1106 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 HK2P52789 917 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 NAB1Q13506 487 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 PCLAFQ15004 111 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 ACAP1Q15027 740 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 HERC3Q15034 1050 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 TMEM132AQ24JP5 1023 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 TDRD10Q5VZ19 366 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 GPR141Q7Z602 305 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 PHTF2Q8N3S3 785 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 SCAIQ8N9R8 606 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 CMASQ8NFW8 434 aaPredicted RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 CHPT1Q8WUD6 406 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 SLC7A3Q8WY07 619 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 PKP2Q99959 881 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 CLK4Q9HAZ1 481 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 EMCNQ9ULC0 261 aa13.79□□□□□ -0.2
SNX12-202ENST00000374274 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
SNX12-202ENST00000374274 LOC100653049A0A140TA62 436 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 SLC15A5A6NIM6 579 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 H0YCG3 227 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 STAM2O75886 525 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 KRT34O76011 436 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 OCM2P0CE71 109 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 OCMP0CE72 109 aaPredicted RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 GLDCP23378 1020 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 MAGEA3P43357 314 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 MTM1Q13496 603 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 IRAK1BP1Q5VVH5 260 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 RFX6Q8HWS3 928 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 GMLQ99445 158 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 DOK1Q99704 481 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 HACD3Q9P035 362 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 GNPTGQ9UJJ9 305 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 PCDHB12Q9Y5F1 795 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 A0A087WXM4 84 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 MYOCOSA0A1B0GUC4 107 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 DHX15O43143 795 aaKnown RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 LRCH4O75427 683 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 GH2P01242 217 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 ME2P23368 584 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 PSMA2P25787 234 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 THOP1P52888 689 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 N4BP2L1Q5TBK1 243 aaPredicted RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 UNC5AQ6ZN44 842 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.29e-9■■■■■ 35.7
SNX12-202ENST00000374274 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 FERMT1Q9BQL6 677 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 VPS33BQ9H267 617 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 MRPL40Q9NQ50 206 aaKnown RBP13.78□□□□□ -0.2
SNX12-202ENST00000374274 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
SNX12-202ENST00000374274 COL4A5P29400 1685 aa13.77□□□□□ -0.2
SNX12-202ENST00000374274 TRIM64BA6NI03 449 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 TCP10L2B9ZVM9 353 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 ZBTB14O43829 449 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 VNN1O95497 513 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 NUDT2P50583 147 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 RPL10AP62906 217 aaKnown RBP13.77□□□□□ -0.21
SNX12-202ENST00000374274 CYTH1Q15438 398 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 MGAT5BQ3V5L5 792 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 MROH9Q5TGP6 573 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
SNX12-202ENST00000374274 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.21
SNX12-202ENST00000374274 DSELQ8IZU8 1212 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms