RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GALNTL6Q49A17 601 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SERINC5Q86VE9 423 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 KCTD13Q8WZ19 329 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC2A13Q96QE2 648 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 RTP3Q9BQQ7 232 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 TRMT13Q9NUP7 481 aaKnown RBP16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 CHKBQ9Y259 395 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 C2orf71A6NGG8 1288 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 ERCC2P18074 760 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MGAT1P26572 445 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 CCND3P30281 292 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 ADRA1BP35368 520 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MNAT1P51948 309 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 IRX4P78413 519 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 ELF3P78545 371 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 PRKCZQ05513 592 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 BNIP1Q12981 228 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 IRF5Q13568 498 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 UPP1Q16831 310 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 SH2D5Q6ZV89 423 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 ZNF567Q8N184 647 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 RFWD2Q8NHY2 731 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 APOPT1Q96IL0 206 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 SRPK1Q96SB4 655 aaKnown RBP16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MANSC1Q9H8J5 431 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 WDR6Q9NNW5 1121 aaKnown RBP16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 STK38LQ9Y2H1 464 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 ZNF487B1APH4 448 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 TSHRP16473 764 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MAGEA3P43357 314 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MAGEA6P43360 314 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC20A2Q08357 652 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 SEMA5AQ13591 1074 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 KCNA10Q16322 511 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 TTC39BQ5VTQ0 682 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 NPWQ8N729 165 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 MCUQ8NE86 351 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 PGBD4Q96DM1 585 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 PCMTD2Q9NV79 361 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 NUMBLQ9Y6R0 609 aa16.47■□□□□ 0.23
CNKSR1-202ENST00000374253 A8MUI8 341 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 COPEO14579 308 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 SPAG6O75602 509 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 GSTA1P08263 222 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 GMPRP36959 345 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 LHX1P48742 406 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 NEK3P51956 506 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 WASHC5Q12768 1159 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 PID1Q7Z2X4 250 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 PARP9Q8IXQ6 854 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 SCAMP5Q8TAC9 235 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 GSDMBQ8TAX9 411 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 GRAMD1AQ96CP6 724 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 KLHL29Q96CT2 875 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 ADAM2Q99965 735 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 XPNPEP3Q9NQH7 507 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 NUDT5Q9UKK9 219 aa16.46■□□□□ 0.23
CNKSR1-202ENST00000374253 A0A0G2JND7 137 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 E2F8A0AVK6 867 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 HMX2A2RU54 273 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 LTFP02788 710 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 SLC10A3P09131 477 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 TPSB2P20231 275 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 PRKCHP24723 683 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 TPI1P60174 286 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 DPYSQ14117 519 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 TPSAB1Q15661 275 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 MFSD14CQ5VZR4 134 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 ZNF449Q6P9G9 518 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 LRRTM3Q86VH5 581 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 STAMBPL1Q96FJ0 436 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 CELF6Q96J87 481 aaKnown RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 IQCGQ9H095 443 aaKnown RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 ZNF395Q9H8N7 513 aaPredicted RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 SPC25Q9HBM1 224 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 SSU72Q9NP77 194 aaKnown RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 PNPLA8Q9NP80 782 aa16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 MKI67P46013 3256 aaKnown RBP16.46■□□□□ 0.22
CNKSR1-202ENST00000374253 HHLA1C9JL84 531 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 TM9SF1O15321 606 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 SNRPAP09012 282 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 ETV4P43268 484 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 MGAT3Q09327 533 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 PRKD1Q15139 912 aaPredicted RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 RGS9BPQ6ZS82 235 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 BNIPLQ7Z465 357 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 HACE1Q8IYU2 909 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 ARMC2Q8NEN0 867 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 C10orf82Q8WW14 230 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 OXNAD1Q96HP4 312 aaPredicted RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 APOL2Q9BQE5 337 aa16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 KLHL8Q9P2G9 620 aaPredicted RBP16.45■□□□□ 0.22
CNKSR1-202ENST00000374253 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms