RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 LRGUKQ96M69 825 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 TMEM109Q9BVC6 243 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 GBA2Q9HCG7 927 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FAM8A1Q9UBU6 413 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 IQCF3P0C7M6 154 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 USP13Q92995 863 aaPredicted RBP18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CDHR5Q9HBB8 845 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 GGA2Q9UJY4 613 aa18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 RUVBL2Q9Y230 463 aaKnown RBP18.17■□□□□ 0.5
TRAF3IP1-201ENST00000373327 C2CD4BA6NLJ0 364 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 RASSF9O75901 435 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PTPN1P18031 435 aaKnown RBP18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 GPR152Q8TDT2 470 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 LHX5Q9H2C1 402 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SUFUQ9UMX1 484 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SMIM28A0A1B0GU29 152 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 MFSD11O43934 449 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ERCC2P18074 760 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SLC1A6P48664 564 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 BNIP1Q12981 228 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 USP4Q13107 963 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PPIL2Q13356 520 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 MPP3Q13368 585 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FSCBQ5H9T9 825 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 LCLAT1Q6UWP7 414 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 P2RY11Q96G91 374 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CSPG4P5Q96PW8 444 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 KCNK16Q96T55 309 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FICDQ9BVA6 458 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 XYLT2Q9H1B5 865 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 C5orf60A6NFR6 353 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 C2CD2LO14523 706 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PAX7P23759 505 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SLC20A2Q08357 652 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PTP4A2Q12974 167 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 VWA5B1Q5TIE3 1220 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SNX30Q5VWJ9 437 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 C15orf39Q6ZRI6 1047 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SCUBE1Q8IWY4 988 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 IFT43Q96FT9 208 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 OMDQ99983 421 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SUDS3Q9H7L9 328 aaPredicted RBP18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SYBUQ9NX95 663 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CLUHO75153 1309 aa18.16■□□□□ 0.5
TRAF3IP1-201ENST00000373327 A0A096LPK6 155 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SMAPO00193 183 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 LMNAP02545 664 aaKnown RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 STX1BP61266 288 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CDK16Q00536 496 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 TSTA3Q13630 321 aaPredicted RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 OASLQ15646 514 aaKnown RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 DDIASQ8IXT1 998 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FAM13CQ8NE31 585 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PHF21BQ96EK2 531 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 LRFN2Q9ULH4 789 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SPDYE5A6NIY4 337 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SMPD1P17405 629 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 KLC1Q07866 573 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SOWAHAQ2M3V2 549 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PYDC1Q8WXC3 89 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 BTBD10Q9BSF8 475 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FRMD8P1Q9BZ68 369 aaPredicted RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ZCWPW1Q9H0M4 648 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ZNF358Q9NW07 568 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SLC4A7Q9Y6M7 1214 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 FDFT1P37268 417 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 RNF43Q68DV7 783 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CLNKQ7Z7G1 428 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 EFHBQ8N7U6 833 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ANLNQ9NQW6 1124 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ARHGEF38Q9NXL2 777 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 GLRA3O75311 464 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PCSK1P29120 753 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PNPLA4P41247 253 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 BRCC3P46736 316 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 COPAP53621 1224 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PLIN5Q00G26 463 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 MGAT5Q09328 741 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 MGAT5BQ3V5L5 792 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 CERCAMQ5T4B2 595 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 DEFB107AQ8IZN7 70 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 ANKRD52Q8NB46 1076 aa18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
TRAF3IP1-201ENST00000373327 PROCP04070 461 aa18.14■□□□□ 0.49
TRAF3IP1-201ENST00000373327 CSH1P0DML2 217 aa18.14■□□□□ 0.49
TRAF3IP1-201ENST00000373327 CSH2P0DML3 217 aa18.14■□□□□ 0.49
TRAF3IP1-201ENST00000373327 TSPAN8P19075 237 aa18.14■□□□□ 0.49
TRAF3IP1-201ENST00000373327 CALB2P22676 271 aa18.14■□□□□ 0.49
TRAF3IP1-201ENST00000373327 SLC25A11Q02978 314 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms