RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 CUL3Q13618 768 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 PIGHQ14442 188 aaPredicted RBP11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 PSMD6Q15008 389 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 LLGL1Q15334 1064 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 XKR4Q5GH76 650 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 RFWD3Q6PCD5 774 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 AAGABQ6PD74 315 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 POLNQ7Z5Q5 900 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 RFWD2Q8NHY2 731 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 RAB3IL1Q8TBN0 382 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 SP7Q8TDD2 431 aaPredicted RBP11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 DCAKDQ8WVC6 231 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 APOPT1Q96IL0 206 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 GBP5Q96PP8 586 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 PPP1R10Q96QC0 940 aaKnown RBP11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 PAFAH2Q99487 392 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 C17orf80Q9BSJ5 609 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 KCNK13Q9HB14 408 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 SORCS3Q9UPU3 1222 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 SSX2IPQ9Y2D8 614 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 CLUHO75153 1309 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TTC3P53804 2025 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 INPPL1O15357 1258 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 CIB2O75838 187 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 KRT36O76013 467 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 IL18RAPO95256 599 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ALDH2P05091 517 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM191BP0C7N4 346 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 PIM1P11309 404 aaPredicted RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TNNI1P19237 187 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 CD58P19256 250 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 CLCN2P51788 898 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 BCAR1P56945 870 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 XIAPP98170 497 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM132DQ14C87 1099 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 FASTKD3Q14CZ7 662 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 DBN1Q16643 649 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ZACNQ401N2 412 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 NAT8LQ8N9F0 302 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 AZIN2Q96A70 460 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 C7orf26Q96N11 449 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 OLFM3Q96PB7 478 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 FNBP1Q96RU3 617 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 CYTH2Q99418 400 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 PAAF1Q9BRP4 392 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 C11orf70Q9BRQ4 267 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 SIKE1Q9BRV8 207 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TMEM120AQ9BXJ8 343 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ZNF518BQ9C0D4 1074 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 ASB7Q9H672 318 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 STRIP2Q9ULQ0 834 aa11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 PRG3Q9Y2Y8 225 aaPredicted RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-201ENST00000372003 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 LPXNO60711 386 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 LSM8O95777 96 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 MT-ND3P03897 115 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 GALTP07902 379 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CRABP2P29373 138 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 SERPINB3P29508 390 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 CTNNB1P35222 781 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PGM1P36871 562 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC11A1P49279 550 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 AP2B1P63010 937 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 SOX4Q06945 474 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 TUSC3Q13454 348 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 WDR72Q3MJ13 1102 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 MFSD7Q6UXD7 560 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 KYAT3Q6YP21 454 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 RINLQ6ZS11 566 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 UCMAQ8WVF2 138 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 ARNTL2Q8WYA1 636 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 RSPH1Q8WYR4 309 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 OXNAD1Q96HP4 312 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 FRMD8Q9BZ67 464 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
TSPAN1-201ENST00000372003 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms