RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SPATA13Q96N96 652 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ETNK2Q9NVF9 386 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 UBDO15205 165 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 LRG1P02750 347 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 TBX4P57082 545 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 SGO1Q5FBB7 561 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 FAM117BQ6P1L5 589 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF398Q8TD17 642 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 CELF6Q96J87 481 aaKnown RBP12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 THUMPD3Q9BV44 507 aaKnown RBP12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 NMRK1Q9NWW6 199 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 GPRC5DQ9NZD1 345 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 ANKRD6Q9Y2G4 727 aa12.15□□□□□ -0.47
DEPDC1-201ENST00000370966 PIK3C2AO00443 1686 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 PLIN4Q96Q06 1357 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 RPL22P35268 128 aaKnown RBP12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 FUKQ8N0W3 1084 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 MYO1HQ8N1T3 1032 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ARHGAP15Q53QZ3 475 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 PKN3Q6P5Z2 889 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 CDCA5Q96FF9 252 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SENP8Q96LD8 212 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 TTYH3Q9C0H2 523 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 A0A0B4J269 797 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ZSCAN9O15535 394 aaPredicted RBP12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 CKMP06732 381 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 NFICP08651 508 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SERPINB3P29508 390 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 TUBP50607 506 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SPDYE7PQ495Y7 208 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ZNF670Q9BS34 389 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 CEP41Q9BYV8 373 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ULBP1Q9BZM6 244 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 ENTPD7Q9NQZ7 604 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 SCN3BQ9NY72 215 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
DEPDC1-201ENST00000370966 KNDC1Q76NI1 1749 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 DEAF1O75398 565 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 NOL4O94818 638 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 APOA1P02647 267 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 SHBGP04278 402 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PLOD1Q02809 727 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 CHRNB3Q05901 458 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 NPY5RQ15761 445 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 HIST2H2ACQ16777 129 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 HIST2H2AA3Q6FI13 130 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 USP50Q70EL3 339 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 DEFB107AQ8IZN7 70 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TRPV2Q9Y5S1 764 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TPST1O60507 370 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 POMCP01189 267 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 DMC1Q14565 340 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 C15orf59Q2T9L4 293 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ATP13A4Q4VNC1 1196 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 RETSATQ6NUM9 610 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TTC33Q6PID6 262 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ZSWIM2Q8NEG5 633 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 HASPINQ8TF76 798 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TINF2Q9BSI4 451 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 IL22Q9GZX6 179 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 C2CD2LO14523 706 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 IRF6O14896 467 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 VAPBO95292 243 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TRUB2O95900 331 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PTPN1P18031 435 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PAX3P23760 479 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 MAPK1P28482 360 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 RHOAP61586 193 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 RPL7AP62424 266 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 UGCGQ16739 394 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 FOXR1Q6PIV2 292 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 KREMEN1Q96MU8 473 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 ACSS3Q9H6R3 686 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 CAAP1Q9H8G2 361 aa12.13□□□□□ -0.47
DEPDC1-201ENST00000370966 VPS28Q9UK41 221 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms