RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PIGNO95427 931 aa13□□□□□ -0.33
GPC4-201ENST00000370828 PRKCBP05771 671 aa13□□□□□ -0.33
GPC4-201ENST00000370828 CSE1LP55060 971 aaKnown RBP13□□□□□ -0.33
GPC4-201ENST00000370828 CSTF3Q12996 717 aaKnown RBP13□□□□□ -0.33
GPC4-201ENST00000370828 PARP8Q8N3A8 854 aa13□□□□□ -0.33
GPC4-201ENST00000370828 OSCP1Q8WVF1 389 aa13□□□□□ -0.33
GPC4-201ENST00000370828 FAM136AQ96C01 138 aa13□□□□□ -0.33
GPC4-201ENST00000370828 CEP41Q9BYV8 373 aa13□□□□□ -0.33
GPC4-201ENST00000370828 LRRC40Q9H9A6 602 aa13□□□□□ -0.33
GPC4-201ENST00000370828 RNF146Q9NTX7 359 aa13□□□□□ -0.33
GPC4-201ENST00000370828 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
GPC4-201ENST00000370828 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 ABCG1P45844 678 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 HSD17B4P51659 736 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 CSHL1Q14406 222 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PDCD4Q53EL6 469 aaKnown RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 AGAP9Q5VTM2 703 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 KYAT3Q6YP21 454 aaKnown RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 PRR23BQ6ZRT6 265 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 TRIM69Q86WT6 500 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 RNASE11Q8TAA1 199 aaKnown RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 EPS8L1Q8TE68 723 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PHF21BQ96EK2 531 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 MBOAT7Q96N66 472 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 GPAMQ9HCL2 828 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 FEM1BQ9UK73 627 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PCDHGB4Q9UN71 923 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 BTBD3Q9Y2F9 522 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 CEP152O94986 1710 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 FAM20BO75063 409 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PDGFRBP09619 1106 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 ABRAQ8N0Z2 381 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 TOR1AIP2Q8NFQ8 470 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 RCN3Q96D15 328 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 NAT9Q9BTE0 207 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 CD274Q9NZQ7 290 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 HS6ST1O60243 411 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 KCTD2Q14681 263 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 OSBPL11Q9BXB4 747 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PCDH12Q9NPG4 1184 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 HPS4Q9NQG7 708 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 PRR23AA6NEV1 266 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 F8VP50 259 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 GP5P40197 560 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 SLC5A3P53794 718 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 ARPP19P56211 112 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 PWP1Q13610 501 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 CENPLQ8N0S6 344 aaPredicted RBP12.99□□□□□ -0.33
GPC4-201ENST00000370828 OSBPL6Q9BZF3 934 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 TAS2R1Q9NYW7 299 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
GPC4-201ENST00000370828 A0A0B4J269 797 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 ZBTB11O95625 1053 aaPredicted RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 FOXN2P32314 431 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 PHKA2P46019 1235 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 VAC14Q08AM6 782 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ATP6AP1LQ52LC2 224 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ABRAXAS1Q6UWZ7 409 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 CLEC4MQ9H2X3 399 aaPredicted RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 PMPCBO75439 489 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 STXBP2Q15833 593 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 DCAF6Q58WW2 860 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 NAPEPLDQ6IQ20 393 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 RASSF5Q8WWW0 418 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 TTYH3Q9C0H2 523 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 STOML2Q9UJZ1 356 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 BARX2Q9UMQ3 279 aaPredicted RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 SYNPO2Q9UMS6 1093 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 DAGLAQ9Y4D2 1042 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 CLASP2O75122 1294 aaKnown RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 PUS10Q3MIT2 529 aaKnown RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
GPC4-201ENST00000370828 TMC7Q7Z402 723 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 TTC39CQ8N584 583 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 HTRA1Q92743 480 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 C2orf40Q9H1Z8 148 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 TPP1O14773 563 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 FSCN2O14926 492 aa12.98□□□□□ -0.33
GPC4-201ENST00000370828 LIASO43766 372 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms