RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GBP5Q96PP8 586 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 MYADMQ96S97 322 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TUBGCP2Q9BSJ2 902 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NSRP1Q9H0G5 558 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 EPHX3Q9H6B9 360 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF334Q9HCZ1 680 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 AIPL1Q9NZN9 384 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 FAM170AA1A519 330 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 MATN2O00339 956 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CBFA2T3O75081 653 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 FAM13AO94988 1023 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 FGFR1OPO95684 399 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 GLI1P08151 1106 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 GM2AP17900 193 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CARSP49589 748 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 RCN1Q15293 331 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 MAPK6Q16659 721 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NDUFA5Q16718 116 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TDRD12Q587J7 1177 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TCP11X2Q5H9J9 407 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 PHLDB3Q6NSJ2 640 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 SEMA4DQ92854 862 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 KLHL29Q96CT2 875 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CGRRF1Q99675 332 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TCHPQ9BT92 498 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 OSBPL10Q9BXB5 764 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 SFXN1Q9H9B4 322 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ITGA11Q9UKX5 1188 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CAPN11Q9UMQ6 739 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CLUHO75153 1309 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 AKAP3O75969 853 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 UPP2O95045 317 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 IL18RAPO95256 599 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ITGA4P13612 1032 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 VAV1P15498 845 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 HOXA6P31267 233 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 SERPINB4P48594 390 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 RAD23BP54727 409 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CSE1LP55060 971 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CREMQ03060 361 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 AP1B1Q10567 949 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TPGS2Q68CL5 300 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 MARK2Q7KZI7 788 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 DPH6Q7L8W6 267 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 DAAM2Q86T65 1068 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 DDX42Q86XP3 938 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 RNF10Q8N5U6 811 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 DYDC1Q8WWB3 177 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 SREK1Q8WXA9 508 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 PSMG2Q969U7 264 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 EFHD2Q96C19 240 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NLRP4Q96MN2 994 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 TCF25Q9BQ70 676 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 DDX47Q9H0S4 455 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 STOML1Q9UBI4 398 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF212Q9UDV6 495 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CD207Q9UJ71 328 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 AJAP1Q9UKB5 411 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ITM2BQ9Y287 266 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 HCN4Q9Y3Q4 1203 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ZFP37Q9Y6Q3 630 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NUP205Q92621 2012 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SHROOM3Q8TF72 1996 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF185O15231 689 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ECI2O75521 394 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 GCNT3O95395 438 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ASS1P00966 412 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 LYNP07948 512 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SRGAP2CP0DJJ0 459 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CCNE1P24864 410 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 JAM2P57087 298 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 C5orf22Q49AR2 442 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 FIGNQ5HY92 759 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ANKRD40Q6AI12 368 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 C8orf74Q6P047 294 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 HOOK3Q86VS8 718 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 FAM186BQ8IYM0 893 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 DDX1Q92499 740 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ELSPBP1Q96BH3 223 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 METTL14Q9HCE5 456 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ETNK2Q9NVF9 386 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 TRIM10Q9UDY6 481 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 FBXL5Q9UKA1 691 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 MTMR11A4FU01 709 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 PODXLO00592 558 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SLC16A3O15427 465 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 AFPP02771 609 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CDK4P11802 303 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CDH5P33151 784 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 PDE6CP51160 858 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ADARP55265 1226 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 PPP3CAQ08209 521 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 KNOP1Q1ED39 458 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms