RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 HAPLN3Q96S86 360 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 CDK5RAP1Q96SZ6 601 aaKnown RBP20.09■□□□□ 0.81
CHTOP-204ENST00000368694 TMEM51Q9NW97 253 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 GRHL1Q9NZI5 618 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 TRPM5Q9NZQ8 1165 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 FAM153AQ9UHL3 310 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 HIDE1A8MVS5 230 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 LRIG2O94898 1065 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 ARHGEF15O94989 841 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 APOEP02649 317 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 CA3P07451 260 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 SRGAP2BP0DMP2 458 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 ETS1P14921 441 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 DNAJB1P25685 340 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 NR2C2P49116 596 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 ZNF135P52742 658 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-204ENST00000368694 SHHQ15465 462 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 TADA2BQ86TJ2 420 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 CCDC33Q8N5R6 958 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 SPPL3Q8TCT6 385 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 CCHCR1Q8TD31 782 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 TRMT2BQ96GJ1 504 aaKnown RBP20.09■□□□□ 0.81
CHTOP-204ENST00000368694 MYRFLQ96LU7 910 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 OSBPL2Q9H1P3 480 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 PRDM16Q9HAZ2 1276 aa20.09■□□□□ 0.81
CHTOP-204ENST00000368694 SLC12A8A0AV02 714 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 MFSD11O43934 449 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 HMBSP08397 361 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 ZSCAN5DPP0CG00 497 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 EPHB2P29323 1055 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 GDF10P55107 478 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 NNTQ13423 1086 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 HDXQ7Z353 690 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 DNAJB7Q7Z6W7 309 aaPredicted RBP20.08■□□□□ 0.81
CHTOP-204ENST00000368694 UNC45BQ8IWX7 931 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 FAM71DQ8N9W8 422 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 FBXO25Q8TCJ0 367 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 SLC39A13Q96H72 371 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 FCRL2Q96LA5 508 aaPredicted RBP20.08■□□□□ 0.81
CHTOP-204ENST00000368694 FMO2Q99518 471 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 DTLQ9NZJ0 730 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 IRAK3Q9Y616 596 aa20.08■□□□□ 0.81
CHTOP-204ENST00000368694 ZNF840PA6NDX5 716 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 KCNU1A8MYU2 1149 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 LPXNO60711 386 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 ERCC2P18074 760 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 ATP5C1P36542 298 aaKnown RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 HCAR3P49019 387 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 SLC10A2Q12908 348 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 TRIP4Q15650 581 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 RWDD4Q6NW29 188 aaKnown RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 ITIH5Q86UX2 942 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 CAVIN3Q969G5 261 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 PSMG2Q969U7 264 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 PCDH9Q9HC56 1237 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 UXTQ9UBK9 157 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 XPO7Q9UIA9 1087 aaKnown RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 C2orf71A6NGG8 1288 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 C5orf67F2Z3F1 127 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 GLUD1P00367 558 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 LRG1P02750 347 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 UBE3AQ05086 875 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 CASP8Q14790 479 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 HECTD3Q5T447 861 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 BZW1Q7L1Q6 419 aaKnown RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 MRPL43Q8N983 215 aaKnown RBP20.07■□□□□ 0.8
CHTOP-204ENST00000368694 LRRN4Q8WUT4 740 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 FUT8Q9BYC5 575 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 ZDHHC18Q9NUE0 388 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 WHRNQ9P202 907 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 SLC12A6Q9UHW9 1150 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 DNMT3LQ9UJW3 386 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 ANAPC1Q9H1A4 1944 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 CHD7Q9P2D1 2997 aa20.07■□□□□ 0.8
CHTOP-204ENST00000368694 DCLK1O15075 740 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 GPS1Q13098 491 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 P3H1Q32P28 736 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 COL13A1Q5TAT6 717 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-204ENST00000368694 SNX30Q5VWJ9 437 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 CCDC149Q6ZUS6 474 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 ATP6V0D2Q8N8Y2 350 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 NETO2Q8NC67 525 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 HS3ST4Q9Y661 456 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 KCNN4O15554 427 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 C8AP07357 584 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 ITIH2P19823 946 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 IVDP26440 423 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 STIP1P31948 543 aaKnown RBP20.06■□□□□ 0.8
CHTOP-204ENST00000368694 LILRA6Q6PI73 481 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 ZDHHC24Q6UX98 284 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 CDKL3Q8IVW4 592 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-204ENST00000368694 KREMEN2Q8NCW0 462 aa20.06■□□□□ 0.8
CHTOP-204ENST00000368694 MTRF1LQ9UGC7 380 aaKnown RBP20.06■□□□□ 0.8
CHTOP-204ENST00000368694 OBSL1O75147 1896 aa20.05■□□□□ 0.8
CHTOP-204ENST00000368694 GRM6O15303 877 aa20.05■□□□□ 0.8
CHTOP-204ENST00000368694 RB1P06400 928 aa20.05■□□□□ 0.8
CHTOP-204ENST00000368694 RBL1P28749 1068 aa20.05■□□□□ 0.8
CHTOP-204ENST00000368694 KPNA1P52294 538 aaPredicted RBP20.05■□□□□ 0.8
CHTOP-204ENST00000368694 ITGA8P53708 1063 aa20.05■□□□□ 0.8
CHTOP-204ENST00000368694 XRCC4Q13426 336 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms