RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
TPM3-210ENST00000368530 SLC4A11Q8NBS3 891 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 RPLP0P6Q8NHW5 317 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 MRPS31Q92665 395 aaKnown RBP10.41□□□□□ -0.74
TPM3-210ENST00000368530 TRIM11Q96F44 468 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 HES6Q96HZ4 224 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 HHIPQ96QV1 700 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 PARD6BQ9BYG5 372 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 TRIM7Q9C029 511 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 VRTNQ9H8Y1 702 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 ANKZF1Q9H8Y5 726 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 VPS45Q9NRW7 570 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
TPM3-210ENST00000368530 UVRAGQ9P2Y5 699 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 ANAPC7Q9UJX3 599 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 ANGPTL2Q9UKU9 493 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 MAGED2Q9UNF1 606 aaPredicted RBP10.41□□□□□ -0.74
TPM3-210ENST00000368530 WASF3Q9UPY6 502 aa10.41□□□□□ -0.74
TPM3-210ENST00000368530 BCLAF3A2AJT9 711 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 C2orf78A6NCI8 922 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 MED7O43513 233 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 SPOPO43791 374 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 MTA2O94776 668 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 STAU1O95793 577 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 PAEPP09466 180 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 TCF3P15923 654 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 PNPLA4P41247 253 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 MARCKSL1P49006 195 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 RPL10AP62906 217 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 MRPS25P82663 173 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 ZNF211Q13398 564 aaPredicted RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 DMC1Q14565 340 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 SOWAHAQ2M3V2 549 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 PHF13Q86YI8 300 aaPredicted RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 LRRC52Q8N7C0 313 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 TMEM35BQ8NCS4 154 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 SPATA4Q8NEY3 305 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 CD101Q93033 1021 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 TMEM176AQ96HP8 235 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 PBKQ96KB5 322 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 HEXIM2Q96MH2 286 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 PNKPQ96T60 521 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 MRPL45Q9BRJ2 306 aaKnown RBP10.4□□□□□ -0.74
TPM3-210ENST00000368530 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 WNT6Q9Y6F9 365 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 OBSL1O75147 1896 aa10.4□□□□□ -0.74
TPM3-210ENST00000368530 K7EQS6 105 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 M0QYV0 167 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 ATP2C2O75185 946 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 LSM8O95777 96 aaKnown RBP10.39□□□□□ -0.75
TPM3-210ENST00000368530 LMO2P25791 158 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 OPRD1P41143 372 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 TSPY1Q01534 308 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 PTP4A2Q12974 167 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 CC2D1AQ6P1N0 951 aaPredicted RBP10.39□□□□□ -0.75
TPM3-210ENST00000368530 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 TMEM86AQ8N2M4 240 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 CPA6Q8N4T0 437 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 WDTC1Q8N5D0 677 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 SPATA18Q8TC71 538 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 KBTBD7Q8WVZ9 684 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 KRT35Q92764 455 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 FAXDC2Q96IV6 333 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 CALR3Q96L12 384 aaKnown RBP10.39□□□□□ -0.75
TPM3-210ENST00000368530 ZNF560Q96MR9 790 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 DUS2Q9NX74 493 aaKnown RBP10.39□□□□□ -0.75
TPM3-210ENST00000368530 UXTQ9UBK9 157 aaPredicted RBP10.39□□□□□ -0.75
TPM3-210ENST00000368530 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 ATG2BQ96BY7 2078 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 ZZEF1O43149 2961 aa10.39□□□□□ -0.75
TPM3-210ENST00000368530 GOLGA8SH3BPF8 625 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 CES2O00748 559 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 GIPC1O14908 333 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 HUS1O60921 280 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 APBB3O95704 486 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 CALB1P05937 261 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 USP17L7P0C7H9 530 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 VDRP11473 427 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 H2AFXP16104 143 aaPredicted RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 MMP8P22894 467 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MAGEA11P43364 429 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 USP46P62068 366 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 INCA1Q0VD86 236 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MESP2Q0VG99 397 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 SGO2Q562F6 1265 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 DCAF12L1Q5VU92 463 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 DAB2IPQ5VWQ8 1189 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PPP1R2P3Q6NXS1 205 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 AADACL2Q6P093 401 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ZNF572Q7Z3I7 529 aaPredicted RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 C12orf29Q8N999 325 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MSANTD4Q8NCY6 345 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 OR6B3Q8NGW1 331 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms