RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DEUP1Q05D60 604 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 LRRC32Q14392 662 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 CDO1Q16878 200 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 CCDC14Q49A88 953 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 DGKKQ5KSL6 1271 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 RAP1GAP2Q684P5 730 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 PRSS33Q8NF86 280 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 DDI1Q8WTU0 396 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 RNF34Q969K3 372 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 BTN2A3PQ96KV6 586 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 MCEEQ96PE7 176 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 ISCUQ9H1K1 167 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 K7EQS6 105 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 RNF40O75150 1001 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 KAT7O95251 611 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 TPM1P09493 284 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PDGFRAP16234 1089 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 HOXD9P28356 352 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 GGCXP38435 758 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 CXCR3P49682 368 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 MTAPQ13126 283 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PPP2R5DQ14738 602 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 MPPE1Q53F39 396 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PIK3R6Q5UE93 754 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 ATP6V0D2Q8N8Y2 350 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 VCPIP1Q96JH7 1222 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 CHP1Q99653 195 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 C2orf42Q9NWW7 574 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 DEC1Q9P2X7 70 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 AKR1B15C9JRZ8 316 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 GALR2O43603 387 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 CYBBP04839 570 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 CISD3P0C7P0 127 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 GPD1P21695 349 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 SEC13P55735 322 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 MS4A13Q5J8X5 152 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PLEKHA7Q6IQ23 1121 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PPP1R2P3Q6NXS1 205 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 CHSY1Q86X52 802 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZNF653Q96CK0 615 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 TMA16Q96EY4 203 aaKnown RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 XPO6Q96QU8 1125 aaKnown RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PRMT1Q99873 361 aaKnown RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 SPATA6Q9NWH7 488 aaPredicted RBP15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 FBXO10Q9UK96 956 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 NENFQ9UMX5 172 aa15.63■□□□□ 0.09
SMPDL3A-201ENST00000368440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 ENDOD1O94919 500 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 APODP05090 189 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 SLC2A3P11169 496 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 COL9A1P20849 921 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 ABCB4P21439 1286 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 TACR2P21452 398 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 SDC4P31431 198 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 RDXP35241 583 aaKnown RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 PTPN9P43378 593 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 DGKGP49619 791 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 RPS24P62847 133 aaKnown RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 OGDHQ02218 1023 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 GFPT1Q06210 699 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 MAMLD1Q13495 774 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 ASTE1Q2TB18 679 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 VPS36Q86VN1 386 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 FAM131BQ86XD5 332 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 CNGA4Q8IV77 575 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 LGI2Q8N0V4 545 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 CFAP52Q8N1V2 620 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 TERB1Q8NA31 727 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 WFDC5Q8TCV5 224 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 EXOC4Q96A65 974 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 TRIM7Q9C029 511 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 TKTL2Q9H0I9 626 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZDHHC4Q9NPG8 344 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 POLR3BQ9NW08 1133 aaPredicted RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 ARHGEF38Q9NXL2 777 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 CNOT8Q9UFF9 292 aaKnown RBP15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 SNX10Q9Y5X0 201 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 HS3ST4Q9Y661 456 aa15.62■□□□□ 0.09
SMPDL3A-201ENST00000368440 CCP110O43303 1012 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 TBL1XO60907 577 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 PAGE1O75459 146 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 HOXC13P31276 330 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 GRIA2P42262 883 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 MAGEA9P43362 315 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 EMC10Q5UCC4 262 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 ALKBH5Q6P6C2 394 aaKnown RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 MAML2Q8IZL2 1156 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 SYNPOQ8N3V7 929 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 FAM172AQ8WUF8 416 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 WDCPQ9H6R7 721 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 STIM2Q9P246 746 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 MYO1AQ9UBC5 1043 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 HCN2Q9UL51 889 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 A0A0A0MRY4 1105 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 PRRT4C9JH25 899 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms