RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 LRRC53A6NM62 1247 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 EFCAB8A8MWE9 144 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 ANXA5P08758 320 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 GRIA2P42262 883 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 RAB33AQ14088 237 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 EPC2Q52LR7 807 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 TMEM31Q5JXX7 168 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 ATG16L1Q676U5 607 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PHYKPLQ8IUZ5 450 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 OR6P1Q8NGX9 317 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 TMEM159Q96B96 161 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PRPF18Q99633 342 aaKnown RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 C17orf62Q9BQA9 187 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 ARHGEF38Q9NXL2 777 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 SENP1Q9P0U3 644 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PCSK1NQ9UHG2 260 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PPFIA2O75334 1257 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 AVILO75366 819 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PSMC3P17980 439 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 FLT3P36888 993 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 SV2AQ7L0J3 742 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D1Q86TI0 1168 aaPredicted RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 MYO1HQ8N1T3 1032 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 MRPL40Q9NQ50 206 aaKnown RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 KLHL3Q9UH77 587 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 FBXL5Q9UKA1 691 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 UBA6A0AVT1 1052 aaPredicted RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 POP4O95707 220 aaKnown RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 FDPSP14324 419 aaKnown RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 FBXW4P57775 412 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 RBL2Q08999 1139 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 DUSP4Q13115 394 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 NAB2Q15742 525 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 RALGPS2Q86X27 583 aaPredicted RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 SELENOSQ9BQE4 189 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 NTPCRQ9BSD7 190 aaKnown RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 PHF7Q9BWX1 381 aaPredicted RBP8.52□□□□□ -1.05
SSR2-202ENST00000368311 MAGEH1Q9H213 219 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 ASTN1O14525 1302 aa8.52□□□□□ -1.05
SSR2-202ENST00000368311 DLG5Q8TDM6 1919 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 NEDD8-MDP1E9PL57 170 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 NDUFA10O95299 355 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 CA3P07451 260 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 FGFR1P11362 822 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ABL2P42684 1182 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 CBX1P83916 185 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 MKRN4PQ13434 485 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 NAB1Q13506 487 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 SPOPLQ6IQ16 392 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 KSR1Q8IVT5 923 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 GRAMD1CQ8IYS0 662 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TMEM145Q8NBT3 493 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ARHGAP9Q9BRR9 750 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 BTBD1Q9H0C5 482 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ARIH1Q9Y4X5 557 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 RREB1Q92766 1687 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3DA0A087WVF3 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3IA0A087WXS9 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3EA0A087X179 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3KA0A087X1G2 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 A0A0A6YYK5 440 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3FA6NER0 549 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 RHPN2P1A8MT19 583 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 SYCE1LA8MT33 242 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3LB9A6J9 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3HP0C7X1 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 HAPLN1P10915 354 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 PTPN9P43378 593 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 SLC18A3Q16572 532 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3GQ6DHY5 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3CQ6IPX1 549 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 AGMOQ6ZNB7 445 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TBC1D3Q8IZP1 549 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 FAM172AQ8WUF8 416 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ATXN2LQ8WWM7 1075 aaKnown RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 CCDC126Q96EE4 140 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 FAR2Q96K12 515 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 FAM83CQ9BQN1 747 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 APOL5Q9BWW9 433 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ACE2Q9BYF1 805 aaPredicted RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 SGK2Q9HBY8 427 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TDP1Q9NUW8 608 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TRMT6Q9UJA5 497 aaKnown RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 FAM47DPA6NHR8 397 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 CFIP05156 583 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 POLBP06746 335 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 SRPRAP08240 638 aaKnown RBP8.51□□□□□ -1.05
SSR2-202ENST00000368311 SLC11A1P49279 550 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ZRANB3Q5FWF4 1079 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 KLHL7Q8IXQ5 586 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 TOP1MTQ969P6 601 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 DPYSL5Q9BPU6 564 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 CBWD1Q9BRT8 395 aa8.51□□□□□ -1.05
SSR2-202ENST00000368311 ULBP1Q9BZM6 244 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms