RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 MSH4O15457 936 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 DKC1O60832 514 aaKnown RBP eCLIP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 PPM1BO75688 479 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 LYPLA2O95372 231 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 POLR2MP0CAP2 368 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 GZMAP12544 262 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 CD247P20963 164 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SOX5P35711 763 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 PBX3P40426 434 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 NOVA1P51513 510 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 STAT2P52630 851 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 MTAPQ13126 283 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RINT1Q6NUQ1 792 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 DPY19L2P1Q6NXN4 242 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 C1orf186Q6ZWK4 172 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 KCTD1Q719H9 257 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 ZNF720Q7Z2F6 126 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 PEX26Q7Z412 305 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 GPR149Q86SP6 731 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SFR1Q86XK3 245 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 FAM186BQ8IYM0 893 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 CELF5Q8N6W0 485 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 ZNF655Q8N720 491 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 MRPL43Q8N983 215 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 LRRC57Q8N9N7 239 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 COLGALT1Q8NBJ5 622 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RDM1Q8NG50 284 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SLC30A5Q8TAD4 765 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RFFLQ8WZ73 363 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 ATP6V0A1Q93050 837 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 HPS3Q969F9 1004 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SLC35C1Q96A29 364 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 LENG9Q96B70 501 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 HES6Q96HZ4 224 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 LRIG1Q96JA1 1093 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 ATP6V1G3Q96LB4 118 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RPS6KC1Q96S38 1066 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 EIF2AK1Q9BQI3 630 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 REEP2Q9BRK0 252 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 STMN4Q9H169 189 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 CNOT10Q9H9A5 744 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 C17orf75Q9HAS0 396 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 EPB41L5Q9HCM4 733 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 SLC2A4RGQ9NR83 387 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RBM12Q9NTZ6 932 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 TBC1D7Q9P0N9 293 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 WHRNQ9P202 907 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 RASAL2Q9UJF2 1139 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 UTP11Q9Y3A2 253 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 MSRB2Q9Y3D2 182 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
ECHDC1-202ENST00000368289 ASCC3Q8N3C0 2202 aaKnown RBP6.84□□□□□ -1.32
ECHDC1-202ENST00000368289 C2orf16Q68DN1 1984 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 IGLV3-22A0A075B6J6 115 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ANKRD34BA5PLL1 514 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ANHXE9PGG2 379 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 PSMD10O75832 226 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 AKAP3O75969 853 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 MTA2O94776 668 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 SLITRK3O94933 977 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GCNT3O95395 438 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 MYZAPP0CAP1 466 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 SRGAP2BP0DMP2 458 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 SMIM10L2AP0DMW4 78 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 SMIM10L2BP0DMW5 78 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 KRT13P13646 458 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GTF2H1P32780 548 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 SLC16A2P36021 539 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 FMO5P49326 533 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GPC5P78333 572 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 GUCY2DQ02846 1103 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 PLCB4Q15147 1175 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 DGKDQ16760 1214 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 DDR2Q16832 855 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 TKFCQ3LXA3 575 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 CEP55Q53EZ4 464 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ARTNQ5T4W7 220 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM102BQ5T8I3 360 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 LRCH2Q5VUJ6 765 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 C11orf63Q6NUN7 778 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 USP17L6PQ6QN14 398 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 C6orf15Q6UXA7 325 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 CEP128Q6ZU80 1094 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 OTOP3Q7RTS5 596 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF571Q7Z3V5 609 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 ADAT2Q7Z6V5 191 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 HOOK3Q86VS8 718 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 NELFCDQ8IXH7 590 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 UBL4BQ8N7F7 174 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 BCAS4Q8TDM0 211 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 MAIP1Q8WWC4 291 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 CTNNBL1Q8WYA6 563 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 KCNN1Q92952 543 aa6.83□□□□□ -1.32
ECHDC1-202ENST00000368289 CENPTQ96BT3 561 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms