RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SIPA1Q96FS4 1042 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 CDC6Q99741 560 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 MIR1-1HGQ9H1L0 117 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 CLSTN2Q9H4D0 955 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 RAB20Q9NX57 234 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-213ENST00000366740 EIF2B4Q9UI10 523 aaKnown RBP12.22□□□□□ -0.45
MRPL55-213ENST00000366740 COQ4Q9Y3A0 265 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 USP3Q9Y6I4 520 aa12.22□□□□□ -0.45
MRPL55-213ENST00000366740 SETXQ7Z333 2677 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 ATXN1LP0C7T5 689 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 PRKCHP24723 683 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 PAK1Q13153 545 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 C10orf120Q5SQS8 335 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 FAM217AQ8IXS0 508 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 GALNT15Q8N3T1 639 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 HNRNPLLQ8WVV9 542 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 JAKMIP2Q96AA8 810 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 CYFIP2Q96F07 1278 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 CDK5RAP1Q96SZ6 601 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 ARID3AQ99856 593 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 NUP58Q9BVL2 599 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
MRPL55-213ENST00000366740 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 OSGEPQ9NPF4 335 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 ELOVL2Q9NXB9 296 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 NAGPAQ9UK23 515 aa12.21□□□□□ -0.45
MRPL55-213ENST00000366740 PTPRQQ9UMZ3 2332 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 STX10O60499 249 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 SYNCRIPO60506 623 aaKnown RBP12.2□□□□□ -0.46
MRPL55-213ENST00000366740 CD58P19256 250 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 TRIM21P19474 475 aaKnown RBP12.2□□□□□ -0.46
MRPL55-213ENST00000366740 FMO5P49326 533 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 COG7P83436 770 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 GPT2Q8TD30 523 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 RHBDD1Q8TEB9 315 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 SLC2A11Q9BYW1 496 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 IMPG2Q9BZV3 1241 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 METTL14Q9HCE5 456 aaKnown RBP12.2□□□□□ -0.46
MRPL55-213ENST00000366740 AGO1Q9UL18 857 aaKnown RBP12.2□□□□□ -0.46
MRPL55-213ENST00000366740 CLEC4EQ9ULY5 219 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 BTBD3Q9Y2F9 522 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 SLCO1B1Q9Y6L6 691 aa12.2□□□□□ -0.46
MRPL55-213ENST00000366740 A0A087WV48 116 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 A0A1B0GVT2 93 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 PAPSS1O43252 624 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 EPHX1P07099 455 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 RALAP11233 206 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 ACADMP11310 421 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 CORO1AP31146 461 aaKnown RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 GRIA4P48058 902 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 CSNK1EP49674 416 aaKnown RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 MARSP56192 900 aaKnown RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 CAMK2GQ13555 558 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 SMAD1Q15797 465 aaKnown RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 PTPRNQ16849 979 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 KIF19Q2TAC6 998 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 ZNF394Q53GI3 561 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 IRF2BP1Q8IU81 584 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 DUSP16Q9BY84 665 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 RWDD2AQ9UIY3 292 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 RASAL2Q9UJF2 1139 aa12.19□□□□□ -0.46
MRPL55-213ENST00000366740 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.19□□□□□ -0.46
MRPL55-213ENST00000366740 ASXL3Q9C0F0 2248 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 TRABD2BA6NFA1 517 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 E9PAM4 449 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 PMM2O15305 246 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 TNFSF14O43557 240 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 PCDHGA12O60330 932 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 CYBBP04839 570 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 ACSL1P33121 698 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 RAD23BP54727 409 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 CYP4F3Q08477 520 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 PDE4CQ08493 712 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 EFEMP1Q12805 493 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 LRMPQ12912 555 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 SUZ12Q15022 739 aaKnown RBP12.18□□□□□ -0.46
MRPL55-213ENST00000366740 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 RAB41Q5JT25 222 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
MRPL55-213ENST00000366740 SERPINA13PQ6UXR4 307 aa12.18□□□□□ -0.46
MRPL55-213ENST00000366740 CACUL1Q86Y37 369 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms