RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CRELD2Q6UXH1 353 aaPredicted RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 FICDQ9BVA6 458 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 NLNQ9BYT8 704 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 PRDM8Q9NQV8 689 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 ZNF112Q9UJU3 913 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 NDUFB5O43674 189 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 RNASEH1O60930 286 aaKnown RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 NPY2RP49146 381 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 ROR2Q01974 943 aaKnown RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 FNDC5Q8NAU1 212 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 MNTQ99583 582 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 VANGL2Q9ULK5 521 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 COQ6Q9Y2Z9 468 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 SKP1P63208 163 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 KYAT3Q6YP21 454 aaKnown RBP17.12■□□□□ 0.33
NID1-202ENST00000366595 PROSER1Q86XN7 944 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 ATG4AQ8WYN0 398 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 TBX20Q9UMR3 447 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
NID1-202ENST00000366595 A0A087X0T9 212 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 IFRD1O00458 451 aaPredicted RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 RIPK2O43353 540 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 GUCY1B2O75343 617 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 FAM228BP0C875 321 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 GSTT1P30711 240 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 SLC26A3P40879 764 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 RPL5P46777 297 aaKnown RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 AKR1D1P51857 326 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 BCAT1P54687 386 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 CDH17Q12864 832 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 TCHHL1Q5QJ38 904 aaPredicted RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 BICRALQ6AI39 1079 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 SFRP1Q8N474 314 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ZNF513Q8N8E2 541 aaPredicted RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 ERBB3P21860 1342 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 RGS14O43566 566 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 SNAP91O60641 907 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 PGAM1P18669 254 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ACADLP28330 430 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ZNF846Q147U1 533 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 USP7Q93009 1102 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 CCDC59Q9P031 241 aaKnown RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 RPL26L1Q9UNX3 145 aaKnown RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 S100A1P23297 94 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 NET1Q7Z628 596 aaPredicted RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 TCAIMQ8N3R3 496 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 POC5Q8NA72 575 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 TBCBQ99426 244 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 RNPEPL1Q9HAU8 725 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 IGKV5-2P06315 115 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 CYP11B2P19099 503 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PON1P27169 355 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 S100GP29377 79 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 GPR15P49685 360 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 AKIRIN2Q53H80 203 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 QRFPRQ96P65 431 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 CCNB1IP1Q9NPC3 277 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 FKBP14Q9NWM8 211 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PCDHA3Q9Y5H8 950 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PRKAR1AP10644 381 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 IL12AP29459 219 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ABRAXAS1Q6UWZ7 409 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 FAM220AQ7Z4H9 259 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 FAM20CQ8IXL6 584 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 PGM2Q96G03 612 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
NID1-202ENST00000366595 GRIP2Q9C0E4 1043 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 TMEM138Q9NPI0 162 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 CLN6Q9NWW5 311 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 AP4E1Q9UPM8 1137 aa17.11■□□□□ 0.33
NID1-202ENST00000366595 ATP4AP20648 1035 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 SMIM11AP58511 58 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 ABATP80404 500 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 BAATQ14032 418 aaPredicted RBP17.1■□□□□ 0.33
NID1-202ENST00000366595 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
NID1-202ENST00000366595 TSPAN14Q8NG11 270 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 CDRT15Q96T59 188 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 CCDC3Q9BQI4 270 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 DPP3Q9NY33 737 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 C2CD2Q9Y426 696 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 SNX8Q9Y5X2 465 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 OGTO15294 1046 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
NID1-202ENST00000366595 TCF4P15884 667 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 KLK7P49862 253 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 KBTBD2Q8IY47 623 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 TPD52L3Q96J77 140 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 WDR12Q9GZL7 423 aaKnown RBP17.1■□□□□ 0.33
NID1-202ENST00000366595 C3orf18Q9UK00 162 aa17.1■□□□□ 0.33
NID1-202ENST00000366595 FAM196BA6NMK8 535 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms