RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MOB2Q70IA6 237 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 AMIGO2Q86SJ2 522 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 ZBTB8OSQ8IWT0 167 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 ZDHHC7Q9NXF8 308 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 CIDEBQ9UHD4 219 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 PCDHGA4Q9Y5G9 962 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 BOLA2-SMG1P6H3BVE0 249 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 METTL25Q8N6Q8 603 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 C1orf127Q8N9H9 656 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 DDX56Q9NY93 547 aaKnown RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 FETUBQ9UGM5 382 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 GPR25O00155 361 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 SIN3BO75182 1162 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 MAFO75444 373 aaPredicted RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 DGKIO75912 1065 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 MICAL2O94851 1124 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 TNFAIP8O95379 198 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 ABCD1P33897 745 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 C16orf72Q14CZ0 275 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 TRNP1Q6NT89 227 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 DUS1LQ6P1R4 473 aaKnown RBP20.21■□□□□ 0.83
TRIM58-201ENST00000366481 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 CMTM5Q96DZ9 223 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 UBAP1Q9NZ09 502 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
TRIM58-201ENST00000366481 E9PBE3 544 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 KCNN4O15554 427 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 KLHL41O60662 606 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 CPOXP36551 454 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 PDE1CQ14123 709 aaPredicted RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 CES4AQ5XG92 561 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 PIWIL2Q8TC59 973 aaKnown RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 CCT7Q99832 543 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 NIFKQ9BYG3 293 aaKnown RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 FAM49BQ9NUQ9 324 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 THAP1Q9NVV9 213 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 THEGQ9P2T0 379 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 DMTF1Q9Y222 760 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 LACTBL1A8MY62 500 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 ITM2AO43736 263 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 ATG7O95352 703 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 LSM8O95777 96 aaKnown RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 F7P08709 466 aaPredicted RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 PDGFRAP16234 1089 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 TCN1P20061 433 aaPredicted RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 FUT4P22083 530 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 YWHAEP62258 255 aaKnown RBP20.2■□□□□ 0.82
TRIM58-201ENST00000366481 GRM2Q14416 872 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 AMHR2Q16671 573 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 LRRC38Q5VT99 294 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 JADE1Q6IE81 842 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 CXCL16Q9H2A7 254 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 PDGFCQ9NRA1 345 aa20.2■□□□□ 0.82
TRIM58-201ENST00000366481 SMIM18P0DKX4 95 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 ATXN1P54253 815 aaKnown RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 ZNF280AP59817 542 aaPredicted RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 MAP1SQ66K74 1059 aaPredicted RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 PDPK2PQ6A1A2 396 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 BBS12Q6ZW61 710 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 PNPOQ9NVS9 261 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 SLC17A6Q9P2U8 582 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 HCRTO43612 131 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 CRTAMO95727 393 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 KRT7P08729 469 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 FAM58BPP0C7Q3 252 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 POLR2BP30876 1174 aaKnown RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 ADGRG6Q86SQ4 1221 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 PQLC1Q8N2U9 271 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 SLC4A11Q8NBS3 891 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 DEPDC1BQ8WUY9 529 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 ZFRQ96KR1 1074 aaKnown RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 C1orf21Q9H246 121 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 RPF1Q9H9Y2 349 aaKnown RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 SH3GLB1Q9Y371 365 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 KLF11O14901 512 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 STAMBPO95630 424 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 MRPS5P82675 430 aaKnown RBP20.19■□□□□ 0.82
TRIM58-201ENST00000366481 MPP3Q13368 585 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 BSPRYQ5W0U4 402 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 EFCAB12Q6NXP0 572 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 GAB3Q8WWW8 586 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 SPATA33Q96N06 139 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 B3GNT5Q9BYG0 378 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 CDT1Q9H211 546 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 CAAP1Q9H8G2 361 aa20.19■□□□□ 0.82
TRIM58-201ENST00000366481 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
TRIM58-201ENST00000366481 FER1L6Q2WGJ9 1857 aa20.18■□□□□ 0.82
TRIM58-201ENST00000366481 BRCA2P51587 3418 aa20.18■□□□□ 0.82
TRIM58-201ENST00000366481 SDR42E2A6NKP2 422 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms