RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 GAREM2Q75VX8 874 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 ERICH1Q86X53 443 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 CRYBG2Q8N1P7 616 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 MSANTD4Q8NCY6 345 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 C1orf131Q8NDD1 294 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 ANKRD7Q92527 254 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 SELENOOQ9BVL4 669 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 GOLPH3Q9H4A6 298 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 OBP2AQ9NY56 170 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 WDR35Q9P2L0 1181 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 EBF1Q9UH73 591 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 AFF4Q9UHB7 1163 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 STRIP2Q9ULQ0 834 aa11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-202ENST00000366216 TCRBV5S1A1TA0A578 114 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 MYO1FO00160 1098 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 KCNK3O14649 394 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 SYN3O14994 580 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 HUS1O60921 280 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 RNF40O75150 1001 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 APBB3O95704 486 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 OR4Q2P0C623 313 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 SETSIPP0DME0 302 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 CTNNA2P26232 953 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 CXCR5P32302 372 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 GPD2P43304 727 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 GABRB2P47870 512 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 MAMLD1Q13495 774 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 MESDQ14696 234 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 PMS2CLQ68D20 193 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 ARHGAP17Q68EM7 881 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 CYP2U1Q7Z449 544 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 RASGEF1CQ8N431 466 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 TTC9BQ8N6N2 239 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 APPL2Q8NEU8 664 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 OR6B3Q8NGW1 331 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 ACTRT1Q8TDG2 376 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 KBTBD7Q8WVZ9 684 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 TSC1Q92574 1164 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 CD101Q93033 1021 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 MIS12Q9H081 205 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 CARD9Q9H257 536 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 ANAPC7Q9UJX3 599 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 TTC7AQ9ULT0 858 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 NME7Q9Y5B8 376 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 MYO18BQ8IUG5 2567 aa11.74□□□□□ -0.53
CSNK1E-202ENST00000366216 A8MXQ7 604 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 H0Y626 953 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 M0QYV0 167 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 PODXLO00592 558 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 TRDMT1O14717 391 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 TRIM16O95361 564 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 EGFP01133 1207 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 COMTP21964 271 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 MAN1A1P33908 653 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 GNL1P36915 607 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 AARSP49588 968 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 LMAN2Q12907 356 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 PKDCCQ504Y2 493 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 SYT13Q7L8C5 426 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 PIP4P1Q86T03 277 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 C11orf74Q86VG3 221 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 MMGT1Q8N4V1 131 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 UBL4BQ8N7F7 174 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 C3orf20Q8ND61 904 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 ADAM32Q8TC27 787 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 BPIFB1Q8TDL5 484 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 C18orf8Q96DM3 657 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 TNIP3Q96KP6 325 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 PSMB7Q99436 277 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 SNX25Q9H3E2 840 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 HPS4Q9NQG7 708 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 IP6K2Q9UHH9 426 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 INVSQ9Y283 1065 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 YIPF1Q9Y548 306 aa11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 V9GYY5 206 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-202ENST00000366216 KNTC1P50748 2209 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 FAM170AA1A519 330 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CCDC66A2RUB6 948 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 TMEM191CA6NGB0 347 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
CSNK1E-202ENST00000366216 CYB561D2O14569 222 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms