RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CNTFP26441 200 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 TLR1Q15399 786 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 TMEM270Q6UE05 265 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 IGDCC3Q8IVU1 814 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-201ENST00000361909 LRRC39Q96DD0 335 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 KIFC3Q9BVG8 833 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 GJD2Q9UKL4 321 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-201ENST00000361909 PIAS1O75925 651 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 C4BPAP04003 597 aaKnown RBP19.61■□□□□ 0.73
CMTM3-201ENST00000361909 EPHB1P54762 984 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 MTTPP55157 894 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 RAB15P59190 212 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 CNGA3Q16281 694 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 TRPC4APQ8TEL6 797 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 AFG1LQ8WV93 481 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 TMEM134Q9H6X4 195 aa19.61■□□□□ 0.73
CMTM3-201ENST00000361909 CCDC160A6NGH7 325 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 DNAJA2O60884 412 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 IGHA2P01877 340 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 CFHP08603 1231 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ALOX15P16050 662 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ZNF132P52740 706 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 EMP3P54852 163 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 NOGQ13253 232 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 MXD4Q14582 209 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ZNF484Q5JVG2 852 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 GJC2Q5T442 439 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 TIFABQ6ZNK6 161 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 PPM1NQ8N819 430 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ADCY4Q8NFM4 1077 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 RSPH1Q8WYR4 309 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 APBA2Q99767 749 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 MARCOQ9UEW3 520 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 PRPF19Q9UMS4 504 aaKnown RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 SH3GLB1Q9Y371 365 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 HNRNPDLO14979 420 aaKnown RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 SIN3BO75182 1162 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 KITP10721 976 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ERFP50548 548 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 EIF3EP60228 445 aaKnown RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 SLC25A11Q02978 314 aaKnown RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 CTAGE3PQ8IX95 158 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 METTL25Q8N6Q8 603 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 TMEM35BQ8NCS4 154 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 PPP1R14CQ8TAE6 165 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 DEPTORQ8TB45 409 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 FNIP1Q8TF40 1166 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 ZNF516Q92618 1163 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 EBF4Q9BQW3 602 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 HAUS8Q9BT25 410 aa19.6■□□□□ 0.73
CMTM3-201ENST00000361909 SENP6Q9GZR1 1112 aaPredicted RBP19.6■□□□□ 0.73
CMTM3-201ENST00000361909 SIP14410 1827 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 CCDC195A0A1B0GUA6 201 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TNPO2O14787 897 aaKnown RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TNFAIP2Q03169 654 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 CES4AQ5XG92 561 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TAS1R3Q7RTX0 852 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ZFP28Q8NHY6 868 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ACMSDQ8TDX5 336 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 GCNAQ96QF7 691 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 SERPINI1Q99574 410 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 C16orf70Q9BSU1 422 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ARHGAP26Q9UNA1 814 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 COL1A2P08123 1366 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TRMUO75648 421 aaKnown RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 PIGRP01833 764 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 PROCP04070 461 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ITGAXP20702 1163 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 CDH5P33151 784 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 GABRB2P47870 512 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 HDAC4P56524 1084 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 OGDHQ02218 1023 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 FSCBQ5H9T9 825 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 RALGPS1Q5JS13 557 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TDRD10Q5VZ19 366 aaKnown RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 TXNRD3NBQ6F5E7 133 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 UNC45BQ8IWX7 931 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ZBTB8BQ8NAP8 495 aaPredicted RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 DNAJC1Q96KC8 554 aaKnown RBP19.59■□□□□ 0.73
CMTM3-201ENST00000361909 BIRC8Q96P09 236 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 ZIC5Q96T25 663 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 FAM213AQ9BRX8 229 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 RNPEPQ9H4A4 650 aa19.59■□□□□ 0.73
CMTM3-201ENST00000361909 CAPN8A6NHC0 703 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 K7ERI5 159 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 ADCY3O60266 1144 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 HNRNPCP07910 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
CMTM3-201ENST00000361909 FAM58BPP0C7Q3 252 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 CCDC130P13994 396 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 IDO1P14902 403 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 KDELR1P24390 212 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 ACADVLP49748 655 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 EFNA5P52803 228 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 ROR1Q01973 937 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 DGKDQ16760 1214 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 MYLK3Q32MK0 819 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 ZNF410Q86VK4 478 aa19.58■□□□□ 0.72
CMTM3-201ENST00000361909 OR6J1Q8NGC5 347 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms