RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 MARCKSL1P49006 195 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 ANKRD20A4Q4UJ75 823 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 ANKRD20A2Q5SQ80 823 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 ANKRD20A1Q5TYW2 823 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 PTAR1Q7Z6K3 402 aaPredicted RBP14.23□□□□□ -0.13
CTR9-201ENST00000361367 SNX31Q8N9S9 440 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 CCT8L2Q96SF2 557 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 C2orf49Q9BVC5 232 aaPredicted RBP14.23□□□□□ -0.13
CTR9-201ENST00000361367 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 TRIM15Q9C019 465 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 EPN3Q9H201 632 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 FAM153AQ9UHL3 310 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 GTF2IRD1Q9UHL9 959 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 GLRA3O75311 464 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 APOA4P06727 396 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 CHKAP35790 457 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 MMP13P45452 471 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 LILRA4P59901 499 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 SMAD3P84022 425 aaKnown RBP14.23□□□□□ -0.13
CTR9-201ENST00000361367 SMARCB1Q12824 385 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 MTBPQ96DY7 904 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 RNF157Q96PX1 679 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 SEZ6LQ9BYH1 1024 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 ADAM28Q9UKQ2 775 aa14.23□□□□□ -0.13
CTR9-201ENST00000361367 IGSF6O95976 241 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 SERPINB8P50452 374 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 CHI3L2Q15782 390 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 DAB2IPQ5VWQ8 1189 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 VSTM1Q6UX27 236 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 FUT8Q9BYC5 575 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 NOL4O94818 638 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 GLUD1P00367 558 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 APLP1P51693 650 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 SLC45A4Q5BKX6 768 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 LDLRAD1Q5T700 205 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 POLNQ7Z5Q5 900 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 ZNF557Q8N988 423 aaPredicted RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 MDM1Q8TC05 714 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 CPXM1Q96SM3 734 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 ANKZF1Q9H8Y5 726 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 PTPN7P35236 360 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 FOXD4Q12950 439 aaPredicted RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 DENND1CQ8IV53 801 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 JOSD2Q8TAC2 188 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 SYNDIG1Q9H7V2 258 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 USP12O75317 370 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 DAB1O75553 588 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 ATP5BP06576 529 aaKnown RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 FGFR1P11362 822 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 LSP1P33241 339 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 HNRNPH2P55795 449 aaKnown RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 POU4F1Q01851 419 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 TLE2Q04725 743 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 POLR1EQ9GZS1 481 aaKnown RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 NRDE2Q9H7Z3 1164 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 MANSC1Q9H8J5 431 aa14.22□□□□□ -0.13
CTR9-201ENST00000361367 MRPL40Q9NQ50 206 aaKnown RBP14.22□□□□□ -0.13
CTR9-201ENST00000361367 MGAT1P26572 445 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTR9-201ENST00000361367 TARBP2Q15633 366 aaKnown RBP14.21□□□□□ -0.13
CTR9-201ENST00000361367 NHSL1Q5SYE7 1610 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 C1orf146Q5VVC0 180 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 PRKD2Q9BZL6 878 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 SLC28A3Q9HAS3 691 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 WWOXQ9NZC7 414 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 SLC24A2Q9UI40 661 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 GGT7Q9UJ14 662 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 ACOT9Q9Y305 439 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 USP15Q9Y4E8 981 aaPredicted RBP14.21□□□□□ -0.13
CTR9-201ENST00000361367 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 PCDH8O95206 1070 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 TRIM16O95361 564 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 H2AFXP16104 143 aaPredicted RBP14.21□□□□□ -0.13
CTR9-201ENST00000361367 NPNTQ6UXI9 565 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 SAPCD2Q86UD0 394 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 MYCBPAPQ8TBZ2 947 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 ZYG11BQ9C0D3 744 aa14.21□□□□□ -0.13
CTR9-201ENST00000361367 RGS17Q9UGC6 210 aaPredicted RBP14.21□□□□□ -0.13
CTR9-201ENST00000361367 ADGRA2Q96PE1 1338 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 TMEM191CA6NGB0 347 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 SPTLC1O15269 473 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 SUPT7LO94864 414 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 EOMESO95936 686 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 ERBB2P04626 1255 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 SPATA31D3P0C874 917 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 ZSCAN5DPP0CG00 497 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 IFNA8P32881 189 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 BCL2L1Q07817 233 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 DNAJC3Q13217 504 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 DPYSL3Q14195 570 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 C6orf10Q5SRN2 563 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 PLPP4Q5VZY2 271 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 LLGL2Q6P1M3 1020 aa14.21□□□□□ -0.14
CTR9-201ENST00000361367 FUT10Q6P4F1 479 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms