RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RBL1P28749 1068 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 SV2CQ496J9 727 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ARMCX4Q5H9R4 360 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 OTUD3Q5T2D3 398 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 RBM15BQ8NDT2 890 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 RP9Q8TA86 221 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 CLPTM1LQ96KA5 538 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PIF1Q9H611 641 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 HBS1LQ9Y450 684 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 TRIM38O00635 465 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PIAS1O75925 651 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 FGRP09769 529 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 GABRB2P47870 512 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 RTP1P59025 263 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 GTF2H3Q13889 308 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 TMC7Q7Z402 723 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PCDH20Q8N6Y1 951 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 SEMA4DQ92854 862 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 CHKBQ9Y259 395 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 CLUHO75153 1309 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 MAP3K13O43283 966 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 JAK1P23458 1154 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 EIF4BP23588 611 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 TAS2R40P59535 323 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ATP6AP1LQ52LC2 224 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 OR8H2Q8N162 312 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 UCMAQ8WVF2 138 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 SLC25A23Q9BV35 468 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 NMUR2Q9GZQ4 415 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 POMKQ9H5K3 350 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 GPBP1L1Q9HC44 474 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 CCDC167Q9P0B6 97 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PACSIN3Q9UKS6 424 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 RAB26Q9ULW5 256 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PMPCBO75439 489 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 PLIN5Q00G26 463 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 LPIN1Q14693 890 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 MARK4Q96L34 752 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 RTKNQ9BST9 563 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 CLK4Q9HAZ1 481 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 PRPF19Q9UMS4 504 aaKnown RBP14.28□□□□□ -0.12
SMC5-201ENST00000361138 RGS5O15539 181 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 LGR5O75473 907 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 BAIAP3O94812 1187 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 HMGCRP04035 888 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 CRABP2P29373 138 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 HMGCS2P54868 508 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 SNX17Q15036 470 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 IL31Q6EBC2 164 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ACOT1Q86TX2 421 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 TBCBQ99426 244 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 APOL2Q9BQE5 337 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 GGA3Q9NZ52 723 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ITGA11Q9UKX5 1188 aa14.28□□□□□ -0.12
SMC5-201ENST00000361138 ABCC6O95255 1503 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 EVPLLA8MZ36 301 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 FAM20BO75063 409 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 UPP2O95045 317 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 CSPG5O95196 566 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 YY1P25490 414 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 CES3Q6UWW8 571 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 SVOPQ8N4V2 548 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 VPS33AQ96AX1 596 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 PCDHB18PQ96TA0 734 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 LNPEPQ9UIQ6 1025 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 PKP3Q9Y446 797 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 PIGNO95427 931 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 SUPT20HL2P0C7V6 817 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 ASTE1Q2TB18 679 aaPredicted RBP14.27□□□□□ -0.12
SMC5-201ENST00000361138 ARSHQ5FYA8 562 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 CEP78Q5JTW2 689 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 SHC3Q92529 594 aa14.27□□□□□ -0.12
SMC5-201ENST00000361138 R3HDM2Q9Y2K5 976 aaKnown RBP14.27□□□□□ -0.12
SMC5-201ENST00000361138 ZNF862O60290 1169 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 GRIK1P39086 918 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 CACNB2Q08289 660 aaPredicted RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 PQLC1Q8N2U9 271 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 SPON2Q9BUD6 331 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 TMEM165Q9HC07 324 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 ZDHHC18Q9NUE0 388 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 TCRBV9S1A1TA0A576 114 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 HACD1B0YJ81 288 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 LYPLA1O75608 230 aaPredicted RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 LRPAP1P30533 357 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 ABRAXAS1Q6UWZ7 409 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 PHF13Q86YI8 300 aaPredicted RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 FICDQ9BVA6 458 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 C6orf62Q9GZU0 229 aaPredicted RBP14.27□□□□□ -0.13
SMC5-201ENST00000361138 POLIQ9UNA4 740 aa14.27□□□□□ -0.13
SMC5-201ENST00000361138 PIN4Q9Y237 131 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms