RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-201ENST00000360718 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
SQSTM1-201ENST00000360718 USP3Q9Y6I4 520 aa13.62□□□□□ -0.23
SQSTM1-201ENST00000360718 STX2P32856 288 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 OR1D2P34982 312 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 PTPN7P35236 360 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 HDAC4P56524 1084 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 ROR1Q01973 937 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 IFRD2Q12894 506 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NR1H3Q13133 447 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 KLF1Q13351 362 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 LRRC14Q15048 493 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NUGGCQ68CJ6 796 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 SLC8B1Q6J4K2 584 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 MFSD7Q6UXD7 560 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 GSTA5Q7RTV2 222 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 CMASQ8NFW8 434 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 TEKT4Q8WW24 435 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 GRAMD1AQ96CP6 724 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 SLC2A13Q96QE2 648 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NAALADL1Q9UQQ1 740 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 ARL2BPQ9Y2Y0 163 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 SLC4A7Q9Y6M7 1214 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 ARHGEF15O94989 841 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 OAS1P00973 400 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NCAM1P13591 858 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 KDELR1P24390 212 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 GLUD2P49448 558 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 USP46P62068 366 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 DSG1Q02413 1049 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 KRT81Q14533 505 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 C9orf50Q5SZB4 431 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 WLSQ5T9L3 541 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 IZUMO3Q5VZ72 239 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 KAZNQ674X7 775 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NUP93Q8N1F7 819 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 FIBCD1Q8N539 461 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 ANKRD42Q8N9B4 389 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 DPF3Q92784 378 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 ABHD8Q96I13 439 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 MTIF3Q9H2K0 278 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 FBXO44Q9H4M3 255 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 NEU2Q9Y3R4 380 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
SQSTM1-201ENST00000360718 M0QYT0 321 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 URODP06132 367 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 ABHD2P08910 425 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 DNAJB2P25686 324 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 CDKN2BP42772 138 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 DUSP4Q13115 394 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 RIPK1Q13546 671 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MGAT5BQ3V5L5 792 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 FAM133BQ5BKY9 247 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 FAM109BQ6ICB4 259 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MAGEB18Q96M61 343 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 NPY6RQ99463 290 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 HERC2P3Q9BVR0 1158 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 CALN1Q9BXU9 219 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MAGEB5Q9BZ81 275 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 FGFR1OP2Q9NVK5 253 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 GBF1Q92538 1859 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 hCG_1818297A0A087WSY0 165 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 C3orf70A6NLC5 250 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MDM4O15151 490 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 FGF18O76093 207 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 CD48P09326 243 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MYOGP15173 224 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 CDH6P55285 790 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 RPL10AP62906 217 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 DEUP1Q05D60 604 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 PDK2Q15119 407 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 BSPRYQ5W0U4 402 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 SPATA21Q7Z572 469 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 GIMAP7Q8NHV1 300 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 SLC7A14Q8TBB6 771 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 EDEM1Q92611 657 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 NT5C3BQ969T7 300 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 TTC25Q96NG3 672 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 SEPT5Q99719 369 aaPredicted RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 R3HDM2Q9Y2K5 976 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-201ENST00000360718 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 F9P00740 461 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 KRT10P13645 584 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 VPS41P49754 854 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 IL9RQ01113 521 aa13.59□□□□□ -0.23
SQSTM1-201ENST00000360718 BTBD8Q5XKL5 378 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms