RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 WDR93Q6P2C0 686 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 SNX32Q86XE0 403 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TPRKBQ9Y3C4 175 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CES2O00748 559 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 RASA1P20936 1047 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CCNJLQ8IV13 435 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CAMKK1Q8N5S9 505 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ITFG1Q8TB96 612 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 KLHL28Q9NXS3 571 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF70Q9UC06 446 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ZSCAN5CA6NGD5 496 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-203ENST00000359759 PSMD12O00232 456 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CYP2C8P10632 490 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 VDRP11473 427 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 MSH3P20585 1137 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ITGA3P26006 1051 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CYP4F2P78329 520 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 CYP4F3Q08477 520 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 LPIN1Q14693 890 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TAF13Q15543 124 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TKFCQ3LXA3 575 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF571Q7Z3V5 609 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-203ENST00000359759 VPS45Q9NRW7 570 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 MRASO14807 208 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 SLC26A4O43511 780 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 B3GAT3O94766 335 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 PCDH8O95206 1070 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 GSTM5P46439 218 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ATG14Q6ZNE5 492 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 COG5Q9UP83 839 aa16.39■□□□□ 0.21
COL18A1-203ENST00000359759 OR6A2O95222 327 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 MRPS22P82650 360 aaKnown RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF621Q6ZSS3 439 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 KCNMB4Q86W47 210 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 KRT73Q86Y46 540 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 RXFP2Q8WXD0 754 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 ADGRE3Q9BY15 652 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 MBD2Q9UBB5 411 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 ERCC2P18074 760 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 BOP1Q14137 746 aaKnown RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 PERM1Q5SV97 790 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 GRTP1Q5TC63 336 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 FOXR1Q6PIV2 292 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 EDEM1Q92611 657 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 LPAR1Q92633 364 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM114B3SHH9 223 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 ELK3P41970 407 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 RALGDSQ12967 914 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 FBXO30Q8TB52 745 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 CENPIQ92674 756 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 EPB41L1Q9H4G0 881 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 DCXO43602 365 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 FAM153BP0C7A2 387 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 IFI35P80217 286 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 SNAPC2Q13487 334 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 FAM153CQ494X1 144 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 ADPRHL2Q9NX46 363 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 RAD51BO15315 384 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 PRMT9Q6P2P2 845 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 KRT74Q7RTS7 529 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 FBXO39Q8N4B4 442 aa16.38■□□□□ 0.21
COL18A1-203ENST00000359759 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
COL18A1-203ENST00000359759 AHCYL1O43865 530 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CPT1AP50416 773 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ILDR2Q71H61 639 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-203ENST00000359759 APBA2Q99767 749 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CIPCQ9C0C6 399 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 TMEM39BQ9GZU3 492 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ZC3H11AO75152 810 aaKnown RBP eCLIP16.37■□□□□ 0.217e-16■□□□□ 8.1
COL18A1-203ENST00000359759 SSTR1P30872 391 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CCR4P51679 360 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CLCN3P51790 818 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 PYDC2Q56P42 97 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ATAD3BQ5T9A4 648 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 TAF8Q7Z7C8 310 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ERO1BQ86YB8 467 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 FAM9CQ8IZT9 166 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 GALNT8Q9NY28 637 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 SLC24A2Q9UI40 661 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 ETS1P14921 441 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 CYP11B2P19099 503 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 MGAT5Q09328 741 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
COL18A1-203ENST00000359759 PLEKHG4BQ96PX9 1271 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms