RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 NANOGQ9H9S0 305 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 TRPC5Q9UL62 973 aaPredicted RBP11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 LTN1O94822 1766 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 WEE2P0C1S8 567 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 CDH1P12830 882 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 ENO3P13929 434 aaPredicted RBP11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 EIF2B5Q13144 721 aaKnown RBP11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 DPYSQ14117 519 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 UGT3A1Q6NUS8 523 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 KCTD8Q6ZWB6 473 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 SLC47A2Q86VL8 602 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 PPM1NQ8N819 430 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 LRTOMTQ8WZ04 291 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 DLG3Q92796 817 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 KAT5Q92993 513 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 PPWD1Q96BP3 646 aaKnown RBP11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 FBXL18Q96ME1 805 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
SEPSECS-201ENST00000358971 FAM172BPA6NC97 362 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 HTRA2O43464 458 aaPredicted RBP11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 LIASO43766 372 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 SERPINB5P36952 375 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 CCDC142Q17RM4 750 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 ZBTB49Q6ZSB9 765 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 SLC22A16Q86VW1 577 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 ABHD11Q8NFV4 315 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 TNIP2Q8NFZ5 429 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 ATL1Q8WXF7 558 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 SH3YL1Q96HL8 342 aaPredicted RBP11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 VPS35Q96QK1 796 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 RTKNQ9BST9 563 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 RAD21L1Q9H4I0 556 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 DGKBQ9Y6T7 804 aa11.71□□□□□ -0.54
SEPSECS-201ENST00000358971 PCM1Q15154 2024 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PIK3R2O00459 728 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 MAN1A2O60476 641 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 MFN2O95140 757 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CAPN1P07384 714 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 GNAO1P09471 354 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CLCQ05315 142 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 BFSP1Q12934 665 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 ANKRD22Q5VYY1 191 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PRR23BQ6ZRT6 265 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PDIK1LQ8N165 341 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 ANKRD60Q9BZ19 345 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PTBP2Q9UKA9 531 aaKnown RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PRPF19Q9UMS4 504 aaKnown RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 ATRNL1Q5VV63 1379 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 SNPHO15079 494 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 GAS7O60861 476 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KRT37O76014 449 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KRT6AP02538 564 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KRT6BP04259 564 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KRT8P05787 483 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 GLULP15104 373 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 FGFR2P21802 821 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 TGM1P22735 817 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 IDH3AP50213 366 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CTSWP56202 376 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 IQSEC1Q6DN90 963 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 NEK5Q6P3R8 708 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 SH2D5Q6ZV89 423 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KYQ8NBH2 561 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 HTRA1Q92743 480 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CDHR1Q96JP9 859 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 LENG8Q96PV6 779 aaPredicted RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PIGSQ96S52 555 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 SNTG2Q9NY99 539 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 ZBTB7AO95365 584 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 BPGMP07738 259 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CKMT2P17540 419 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 ME2P23368 584 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 BDNFP23560 247 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 PRKAA2P54646 552 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 CETN1Q12798 172 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 KLF10Q13118 480 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 BMPR2Q13873 1038 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 COG2Q14746 738 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 SPCS2Q15005 226 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
SEPSECS-201ENST00000358971 MTX3Q5HYI7 312 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms