RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 NSUN2Q08J23 767 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 POU6F1Q14863 301 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 UGP2Q16851 508 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 C16orf87Q6PH81 154 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 PLEKHH3Q7Z736 793 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL20A1-201ENST00000358894 EFHD1Q9BUP0 239 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 ATXN3LQ9H3M9 355 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
COL20A1-201ENST00000358894 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CLDN5O00501 218 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 C2CD2LO14523 706 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 PDE5AO76074 875 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 TMCC1O94876 653 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CSPG5O95196 566 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 GP5P40197 560 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CYLC2Q14093 348 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SIX1Q15475 284 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 LAYNQ6UX15 382 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CLNKQ7Z7G1 428 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CCNJLQ8IV13 435 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 FNIP1Q8TF40 1166 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SARS2Q9NP81 518 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SAR1AQ9NR31 198 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SLC38A7Q9NVC3 462 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CHKBQ9Y259 395 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SCN7AQ01118 1682 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 MAGEA13PA6NCF6 341 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 TPP1O14773 563 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 PYGLP06737 847 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 KLRC2P26717 231 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 WASHC2DQ5SRD0 308 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 TMPRSS6Q8IU80 811 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 OR52K1Q8NGK4 314 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 FAM136AQ96C01 138 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 C12orf42Q96LP6 360 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 KCNK16Q96T55 309 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SYT15Q9BQS2 421 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 ILKAPQ9H0C8 392 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 PDP2Q9P2J9 529 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 EFR3BQ9Y2G0 817 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 BNIP3LO60238 219 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SOX11P35716 441 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 ETFBP38117 255 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 NR2C2P49116 596 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 ATXN1P54253 815 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 MBTD1Q05BQ5 628 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 SLC10A6Q3KNW5 377 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 FAM13CQ8NE31 585 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 EBNA1BP2Q99848 306 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 DDX18Q9NVP1 670 aaKnown RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 NUDT5Q9UKK9 219 aa12.58□□□□□ -0.4
COL20A1-201ENST00000358894 PRG3Q9Y2Y8 225 aaPredicted RBP12.58□□□□□ -0.4
COL20A1-201ENST00000358894 A0A096LPK6 155 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 A0A0A0MRY4 1105 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 C17orf102A2RUQ5 167 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 MTSS1O43312 755 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 KRT36O76013 467 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 PIGRP01833 764 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 PCYT1AP49585 367 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 SERPINB8P50452 374 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 BEX3Q00994 111 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DPY19L2P1Q6NXN4 242 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ANKS1BQ7Z6G8 1248 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 SLC44A1Q8WWI5 657 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 SPATA13Q96N96 652 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 SH3BP1Q9Y3L3 701 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 DCXO43602 365 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 MGRN1O60291 552 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 MT-CO1P00395 513 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ETS2P15036 469 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 GTF2A2P52657 109 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ACVR2BQ13705 512 aa12.57□□□□□ -0.4
COL20A1-201ENST00000358894 ANKRD20A4Q4UJ75 823 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms