RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 BAP1Q92560 729 aa17.68■□□□□ 0.42
FAM3D-201ENST00000358781 BTN2A3PQ96KV6 586 aa17.68■□□□□ 0.42
FAM3D-201ENST00000358781 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
FAM3D-201ENST00000358781 NUCKS1Q9H1E3 243 aaKnown RBP17.68■□□□□ 0.42
FAM3D-201ENST00000358781 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.68■□□□□ 0.42
FAM3D-201ENST00000358781 RRN3Q9NYV6 651 aa17.68■□□□□ 0.42
FAM3D-201ENST00000358781 EBF1Q9UH73 591 aa17.68■□□□□ 0.42
FAM3D-201ENST00000358781 EML5Q05BV3 1969 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 SYNJ2BP-COX16A0A087WUM0 186 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 AXIN1O15169 862 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 HNRNPLP14866 589 aaKnown RBP eCLIP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 MMP8P22894 467 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 SRSF5Q13243 272 aaKnown RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 MMS22LQ6ZRQ5 1243 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 ANKS1BQ7Z6G8 1248 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 ATP6V0D2Q8N8Y2 350 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 HJURPQ8NCD3 748 aaPredicted RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 PRICKLE1Q96MT3 831 aaPredicted RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 NPY6RQ99463 290 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 AGPAT1Q99943 283 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 COX16Q9P0S2 106 aa17.67■□□□□ 0.42
FAM3D-201ENST00000358781 XPO7Q9UIA9 1087 aaKnown RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
FAM3D-201ENST00000358781 SPAG17Q6Q759 2223 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 KCNU1A8MYU2 1149 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 GOLGA8SH3BPF8 625 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 TBL1XO60907 577 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 UNGP13051 313 aaPredicted RBP17.66■□□□□ 0.42
FAM3D-201ENST00000358781 NTSR1P30989 418 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 CCR1P32246 355 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 NME3Q13232 169 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 CLEC16AQ2KHT3 1053 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 MS4A13Q5J8X5 152 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 OTUD1Q5VV17 481 aaPredicted RBP17.66■□□□□ 0.42
FAM3D-201ENST00000358781 IRF2BP2Q7Z5L9 587 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 RNF34Q969K3 372 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 NT5C3BQ969T7 300 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 MYEOVQ96EZ4 313 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 SLC12A6Q9UHW9 1150 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 TMEM59LQ9UK28 342 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 STAP1Q9ULZ2 295 aa17.66■□□□□ 0.42
FAM3D-201ENST00000358781 M0QYT0 321 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ABCB4P21439 1286 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 HLA-FP30511 346 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 WASP42768 502 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
FAM3D-201ENST00000358781 UBASH3AP57075 661 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 RPS24P62847 133 aaKnown RBP17.65■□□□□ 0.42
FAM3D-201ENST00000358781 CENPCQ03188 943 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 SIM2Q14190 667 aaPredicted RBP17.65■□□□□ 0.42
FAM3D-201ENST00000358781 RAP1GAP2Q684P5 730 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ANO7Q6IWH7 933 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ARCQ7LC44 396 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 RASSF3Q86WH2 238 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 CHPFQ8IZ52 775 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 GAB3Q8WWW8 586 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ACOX2Q99424 681 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 C11orf70Q9BRQ4 267 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ADAM33Q9BZ11 813 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 TTYH3Q9C0H2 523 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 POLMQ9NP87 494 aaPredicted RBP17.65■□□□□ 0.42
FAM3D-201ENST00000358781 ELOVL2Q9NXB9 296 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 CALCOCO1Q9P1Z2 691 aa17.65■□□□□ 0.42
FAM3D-201ENST00000358781 SDK1Q7Z5N4 2213 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TYW5A2RUC4 315 aaKnown RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 LRRC53A6NM62 1247 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TIMM44O43615 452 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 RPP40O75818 363 aaKnown RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 ALDH1A2O94788 518 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 HOXB2P14652 356 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TFE3P19532 575 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TACR2P21452 398 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 FLT3P36888 993 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PBX1P40424 430 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 SULT1E1P49888 294 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PTP4A2Q12974 167 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 MTA1Q13330 715 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 EIF4HQ15056 248 aaKnown RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 NFKBIBQ15653 356 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 SLC25A52Q3SY17 297 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TMEM215Q68D42 235 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 SDE2Q6IQ49 451 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TRNP1Q6NT89 227 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PRR23BQ6ZRT6 265 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 KIAA0907Q7Z7F0 614 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 CHSY1Q86X52 802 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PHF13Q86YI8 300 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 LGI2Q8N0V4 545 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 ZNF557Q8N988 423 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 WFDC5Q8TCV5 224 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 WFIKKN2Q8TEU8 576 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 UCMAQ8WVF2 138 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PGAP3Q96FM1 320 aaPredicted RBP17.64■□□□□ 0.41
FAM3D-201ENST00000358781 TBCBQ99426 244 aa17.64■□□□□ 0.41
FAM3D-201ENST00000358781 PRMT1Q99873 361 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms