RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 COX16Q9P0S2 106 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 ZFATQ9P243 1243 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 GJD2Q9UKL4 321 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 CORO1CQ9ULV4 474 aaPredicted RBP8.85□□□□□ -0.99
RFX3-202ENST00000358730 SDR42E2A6NKP2 422 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 HACD1B0YJ81 288 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 PRR5-ARHGAP8B1AHC4 643 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 GLRA3O75311 464 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 LYPLA1O75608 230 aaPredicted RBP8.85□□□□□ -0.99
RFX3-202ENST00000358730 DGKIO75912 1065 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 AKAP5P24588 427 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 LMO2P25791 158 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 SCNN1AP37088 669 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 ARHGAP8P85298 464 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 SLC34A1Q06495 639 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 NIPAL4Q0D2K0 466 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 WASHC5Q12768 1159 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 ZBTB6Q15916 424 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 PACS1Q6VY07 963 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 STRADAQ7RTN6 431 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 SHCBP1Q8NEM2 672 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 KBTBD7Q8WVZ9 684 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 NRG4Q8WWG1 115 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 ATP2A3Q93084 1043 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
RFX3-202ENST00000358730 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 SNX25Q9H3E2 840 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 XPNPEP3Q9NQH7 507 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.85□□□□□ -0.99
RFX3-202ENST00000358730 GTF2IRD1Q9UHL9 959 aa8.85□□□□□ -0.99
RFX3-202ENST00000358730 PDCD11Q14690 1871 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 DCAF8L1A6NGE4 600 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MAGEC1O60732 1142 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CIB2O75838 187 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ALDH1A2O94788 518 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MLNP12872 115 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PGAM1P18669 254 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PSMB4P28070 264 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 GNL1P36915 607 aaPredicted RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 ACADSBP45954 432 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ERFP50548 548 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 RAP1GDS1P52306 607 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CDK18Q07002 472 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ADIGQ0VDE8 80 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 TBCCQ15814 346 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ZNF792Q3KQV3 632 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ZNF618Q5T7W0 954 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MBLAC2Q68D91 279 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 NOTUMQ6P988 496 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 LRRC8BQ6P9F7 803 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 RASSF3Q86WH2 238 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 WDR75Q8IWA0 830 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 HACE1Q8IYU2 909 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 DEFB106AQ8N104 65 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CCNYQ8ND76 341 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CFAP61Q8NHU2 1237 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PPP1R13LQ8WUF5 828 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 NDRG1Q92597 394 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 OSMRQ99650 979 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 SETD4Q9NVD3 440 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 IL1RAPL1Q9NZN1 696 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 STX18Q9P2W9 335 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 EMCNQ9ULC0 261 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 DNAJC16Q9Y2G8 782 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PSAT1Q9Y617 370 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 WASF2Q9Y6W5 498 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MEI4A8MW99 385 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ITM2AO43736 263 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CREB3O43889 395 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 OPHN1O60890 802 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 SERPINA6P08185 405 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MMP3P08254 477 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 TKTP29401 623 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 MATKP42679 507 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 KLC1Q07866 573 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PDE1CQ14123 709 aaPredicted RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 DNAL1Q4LDG9 190 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 DCAF6Q58WW2 860 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 C6orf163Q5TEZ5 329 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 SCUBE1Q8IWY4 988 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 ULK2Q8IYT8 1036 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 NME8Q8N427 588 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PIWIL2Q8TC59 973 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 ACMSDQ8TDX5 336 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 RNF139Q8WU17 664 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 PGBD4Q96DM1 585 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 P2RY11Q96G91 374 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CLPTM1LQ96KA5 538 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 FERMT1Q9BQL6 677 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 THTPAQ9BU02 230 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 CCDC106Q9BWC9 280 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 EIF2B3Q9NR50 452 aaKnown RBP8.84□□□□□ -0.99
RFX3-202ENST00000358730 TMPRSS4Q9NRS4 437 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 SYBUQ9NX95 663 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 KLK14Q9P0G3 267 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 TXNDC16Q9P2K2 825 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 FZD10Q9ULW2 581 aa8.84□□□□□ -0.99
RFX3-202ENST00000358730 UBQLN1Q9UMX0 589 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms