RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RAB2BQ8WUD1 216 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 HSPBAP1Q96EW2 488 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 VPS4BO75351 444 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ITGAXP20702 1163 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 FRG1Q14331 258 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 NOP9Q86U38 636 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ACSF2Q96CM8 615 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF317Q96PQ6 595 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ELOVL6Q9H5J4 265 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 MYO5CQ9NQX4 1742 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 FARP2O94887 1054 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 RBP1P09455 135 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 GPC3P51654 580 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 AP3M2P53677 418 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 TRIM71Q2Q1W2 868 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 MTERF2Q49AM1 385 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF394Q53GI3 561 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 GSTCDQ8NEC7 633 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 WDR36Q8NI36 951 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ADAM28Q9UKQ2 775 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF804BA4D1E1 1349 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ABCC3O15438 1527 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 TLR2O60603 784 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 RRM1P23921 792 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 TNFAIP2Q03169 654 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 FAXCQ5TGI0 409 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 DNAAF5Q86Y56 855 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 SSU72Q9NP77 194 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PTGES3LE9PB15 166 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ADORA2BP29275 332 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 CRKP46108 304 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 SPIRE1Q08AE8 756 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 TSNQ15631 228 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 RFX4Q33E94 735 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 SLC27A3Q5K4L6 730 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 C6orf89Q6UWU4 347 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 STK32CQ86UX6 486 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 SCFD2Q8WU76 684 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 DNAJC28Q9NX36 388 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC42Q9Y546 428 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 CRTAMO95727 393 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PDGFRBP09619 1106 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PSMC5P62195 406 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 QRICH1Q2TAL8 776 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF677Q86XU0 584 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC17Q8N6Y2 441 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 GALNT6Q8NCL4 622 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 ALG3Q92685 438 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PCDHGA10Q9Y5H3 936 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 RGL2O15211 777 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 RAB25P57735 213 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 SLC9A4Q6AI14 798 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PPP4R4Q6NUP7 873 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 FASTKD5Q7L8L6 764 aaKnown RBP6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PAGE2Q7Z2X7 111 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 PEX16Q9Y5Y5 336 aa6.22□□□□□ -1.41
VPS13B-203ENST00000358544 INO80B-WBP1J3KQ70 363 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 CCRL2O00421 344 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 MAGEB2O15479 319 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 FXR2P51116 673 aaKnown RBP eCLIP6.21□□□□□ -1.417e-6■■■■□ 23.7
VPS13B-203ENST00000358544 PWP1Q13610 501 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 ATP6AP1LQ52LC2 224 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 CYP4V2Q6ZWL3 525 aaPredicted RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 SZRD1Q7Z422 152 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 FAM228AQ86W67 206 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 GRPEL2Q8TAA5 225 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 CABLES1Q8TDN4 633 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 PNPLA8Q9NP80 782 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 JCADQ9P266 1359 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 WDR27A2RRH5 827 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 PRDX6P30041 224 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 FOXN2P32314 431 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 TALDO1P37837 337 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 RABL6Q3YEC7 729 aaPredicted RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 GPAT2Q6NUI2 795 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 TLDC1Q6P9B6 456 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 ERI1Q8IV48 349 aaKnown RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 RBM15BQ8NDT2 890 aaKnown RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 NXNL1Q96CM4 212 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC4Q9HBW1 653 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 SHROOM2Q13796 1616 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 ATG7O95352 703 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 TPI1P60174 286 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 CRTC3Q6UUV7 619 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 MCOLN2Q8IZK6 566 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 OTULINQ96BN8 352 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 DNAJC18Q9H819 358 aa6.21□□□□□ -1.41
VPS13B-203ENST00000358544 TRMT13Q9NUP7 481 aaKnown RBP6.21□□□□□ -1.41
VPS13B-203ENST00000358544 HEATR5AQ86XA9 2040 aa6.21□□□□□ -1.42
VPS13B-203ENST00000358544 RBAK-RBAKDNI3L0D1 243 aa6.21□□□□□ -1.42
VPS13B-203ENST00000358544 M0QX08 132 aa6.21□□□□□ -1.42
VPS13B-203ENST00000358544 AKAP3O75969 853 aa6.21□□□□□ -1.42
VPS13B-203ENST00000358544 PRKAR1AP10644 381 aa6.21□□□□□ -1.42
VPS13B-203ENST00000358544 PABPC1P11940 636 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms