RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 RAP1GAP2Q684P5 730 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 PYROXD2Q8N2H3 581 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 SLC44A3Q8N4M1 653 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 NXPE3Q969Y0 559 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 HAPLN3Q96S86 360 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 FAM83CQ9BQN1 747 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 SNRNP25Q9BV90 132 aaKnown RBP15.4■□□□□ 0.06
CCNE1-202ENST00000357943 TRMT61BQ9BVS5 477 aaKnown RBP15.4■□□□□ 0.06
CCNE1-202ENST00000357943 SIK2Q9H0K1 926 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 GPATCH2LQ9NWQ4 482 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 THG1LQ9NWX6 298 aaKnown RBP15.4■□□□□ 0.06
CCNE1-202ENST00000357943 IGSF9Q9P2J2 1179 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 ZNF510Q9Y2H8 683 aa15.4■□□□□ 0.06
CCNE1-202ENST00000357943 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 TRDMT1O14717 391 aaKnown RBP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 LATS1O95835 1130 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 TNNT1P13805 278 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 GDI1P31150 447 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 SLC6A4P31645 630 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 GJC1P36383 396 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 TNK2Q07912 1038 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 SCAPQ12770 1279 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 CA9Q16790 459 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 HADHQ16836 314 aaKnown RBP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 EML3Q32P44 896 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 ATP13A4Q4VNC1 1196 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 ERMARDQ5T6L9 678 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 RFWD3Q6PCD5 774 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FAM217AQ8IXS0 508 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 YAF2Q8IY57 180 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 ADGRG2Q8IZP9 1017 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 KIAA1958Q8N8K9 716 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 MYEOVQ96EZ4 313 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 P2RY11Q96G91 374 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 PRMT1Q99873 361 aaKnown RBP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 EBF3Q9H4W6 596 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 TBC1D14Q9P2M4 693 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FAM72CH0Y354 149 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FTCDO95954 541 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 RARAP10276 462 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 ARSAP15289 507 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 IFNAR2P48551 515 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 AIF1P55008 147 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 MLLT6P55198 1093 aaPredicted RBP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 BOLA3Q53S33 107 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 EFHC2Q5JST6 749 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FAM72AQ5TYM5 149 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FAM72DQ6L9T8 149 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 TPGS1Q6ZTW0 290 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 C14orf80Q86SX3 495 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 CHSY1Q86X52 802 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 FAM72BQ86X60 149 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCNE1-202ENST00000357943 HSPH1Q92598 858 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 HPS4Q9NQG7 708 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 AP4E1Q9UPM8 1137 aa15.39■□□□□ 0.05
CCNE1-202ENST00000357943 OTOL1A6NHN0 477 aaPredicted RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 ARNTLO00327 626 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 GFRA2O00451 464 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 SLC9A3R1O14745 358 aaPredicted RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 CHADO15335 359 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 TSPAN3O60637 253 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 TACR2P21452 398 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 CHKAP35790 457 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 SGSHP51688 502 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 MTA1Q13330 715 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 AUHQ13825 339 aaKnown RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 ARTNQ5T4W7 220 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 NT5DC3Q86UY8 548 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 TMEM25Q86YD3 366 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 SYCE1Q8N0S2 351 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 CPXM2Q8N436 756 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 CD101Q93033 1021 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 BHMTQ93088 406 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 OTUB2Q96DC9 234 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 C1orf74Q96LT6 269 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 PRICKLE1Q96MT3 831 aaPredicted RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 OSBPL2Q9H1P3 480 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 DHX35Q9H5Z1 703 aaKnown RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 BRD9Q9H8M2 597 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 KLHL11Q9NVR0 708 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 OR12D3Q9UGF7 316 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 VANGL2Q9ULK5 521 aa15.38■□□□□ 0.05
CCNE1-202ENST00000357943 PACSIN2Q9UNF0 486 aaPredicted RBP15.38■□□□□ 0.05
CCNE1-202ENST00000357943 TCF20Q9UGU0 1960 aaKnown RBP15.37■□□□□ 0.05
CCNE1-202ENST00000357943 NARSO43776 548 aaKnown RBP15.37■□□□□ 0.05
CCNE1-202ENST00000357943 SRGAP2O75044 1071 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 MARCKSL1P49006 195 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 PDGFRLQ15198 375 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 FBXL22Q6P050 247 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 RHBDF2Q6PJF5 856 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 RHOT1Q8IXI2 618 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
CCNE1-202ENST00000357943 TEKT4Q8WW24 435 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms