RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 FBXO42Q6P3S6 717 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 PHF11Q9UIL8 331 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 RPAP1Q9BWH6 1393 aaPredicted RBP10.78□□□□□ -0.68
FXR1-202ENST00000357559 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 MAGEB2O15479 319 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 ATP9AO75110 1047 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 SREBF2Q12772 1141 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 CUL2Q13617 745 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 FAM220AQ7Z4H9 259 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 PALB2Q86YC2 1186 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 NIF3L1Q9GZT8 377 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 FLT1P17948 1338 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 ADGRA3Q8IWK6 1321 aa10.78□□□□□ -0.68
FXR1-202ENST00000357559 BMP10O95393 424 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 ECDO95905 644 aaPredicted RBP10.77□□□□□ -0.68
FXR1-202ENST00000357559 OR1E1P30953 314 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 GPR15P49685 360 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 TTC23Q5W5X9 447 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PROX1Q92786 737 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 TP53INP1Q96A56 240 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 MBD2Q9UBB5 411 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PBRM1Q86U86 1689 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 WDR27A2RRH5 827 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 FAM86B1E9PN63 330 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PSMD9O00233 223 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 S100A9P06702 114 aaKnown RBP10.77□□□□□ -0.68
FXR1-202ENST00000357559 KLHL12Q53G59 568 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 TMEM159Q96B96 161 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 TMEM237Q96Q45 408 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PLEKHF1Q96S99 279 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 OMDQ99983 421 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 PTPRTO14522 1441 aa10.77□□□□□ -0.68
FXR1-202ENST00000357559 A0A1W2PRG6 482 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 JCHAINP01591 159 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 PDHBP11177 359 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 RPL4P36578 427 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 CLCN3P51790 818 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 SLC47A2Q86VL8 602 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 CASKIN2Q8WXE0 1202 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 SLC9A6Q92581 669 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 OXCT2Q9BYC2 517 aaPredicted RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 TBX20Q9UMR3 447 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ENTPD4Q9Y227 616 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 CCDC189A1A4V9 331 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 KPNA6O60684 536 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 HSD3B2P26439 372 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 HPCAL1P37235 193 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 NPY2RP49146 381 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ACAP1Q15027 740 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ACAD10Q6JQN1 1059 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 TRNT1Q96Q11 434 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 PTCH1Q13635 1447 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 SNUPNO95149 360 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 STAG3L1P0CL83 205 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 NFKB1P19838 968 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ATP5F1P24539 256 aaPredicted RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 KPNB1Q14974 876 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 COLGALT1Q8NBJ5 622 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 SETD6Q8TBK2 473 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 TRIM9Q9C026 710 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 CAB39LQ9H9S4 337 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 PCDHB2Q9Y5E7 798 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 GPR182O15218 404 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 OR10H2O60403 315 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 AMD1P17707 334 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 TNFSF13BQ9Y275 285 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 LRCH1Q9Y2L9 728 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 PNMA8CA0A1B0GUJ8 204 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 NDUFB10O96000 172 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 SLC2A3P11169 496 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 NQO1P15559 274 aaKnown RBP10.77□□□□□ -0.69
FXR1-202ENST00000357559 PLD1Q13393 1074 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 MILR1Q7Z6M3 343 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 KBTBD2Q8IY47 623 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 ATP6V1C2Q8NEY4 427 aa10.77□□□□□ -0.69
FXR1-202ENST00000357559 EGFRP00533 1210 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 ACAT1P24752 427 aaKnown RBP10.76□□□□□ -0.69
FXR1-202ENST00000357559 PJA1Q8NG27 643 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 GAL3ST3Q96A11 431 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 ITGADQ13349 1161 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 TMEM132CQ8N3T6 1108 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 ING3Q9NXR8 418 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 ATP10AO60312 1499 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 DCDC2CA8MYV0 355 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 FASTKQ14296 549 aaKnown RBP10.76□□□□□ -0.69
FXR1-202ENST00000357559 GRB14Q14449 540 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 SMU1Q2TAY7 513 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 IL27RAQ6UWB1 636 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 TRPV3Q8NET8 790 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 PPP1R13LQ8WUF5 828 aa10.76□□□□□ -0.69
FXR1-202ENST00000357559 ELMO1Q92556 727 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms