RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 INPP4BO15327 924 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 CPSF4O95639 269 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 CRABP2P29373 138 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 RCVRNP35243 200 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 AKR1D1P51857 326 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 GOLGA7BQ2TAP0 167 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 STX12Q86Y82 276 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 IZUMO1Q8IYV9 350 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 MIER2Q8N344 545 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 FIG4Q92562 907 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 KLHL1Q9NR64 748 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 ANKEF1Q9NU02 776 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 SUPT20HL2P0C7V6 817 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 ETS1P14921 441 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MPP3Q13368 585 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 RNF43Q68DV7 783 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 SCARA3Q6AZY7 606 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 TMEM132CQ8N3T6 1108 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 Q96MT0 163 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 RECQL5O94762 991 aaPredicted RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MYBP10242 640 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 HNMTP50135 292 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 NAA20P61599 178 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 TRIM28Q13263 835 aaKnown RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 NEK5Q6P3R8 708 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 SFRP1Q8N474 314 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 CCNB1IP1Q9NPC3 277 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 PNPLA3Q9NST1 481 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 BMP10O95393 424 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 PRKAR1AP10644 381 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 ATP6V1C1P21283 382 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 PCSK9Q8NBP7 692 aaKnown RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 ITFG1Q8TB96 612 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MNTQ99583 582 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 FAM118BQ9BPY3 351 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 LRMDAQ9H2I8 198 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MAPRE3Q9UPY8 281 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 CCDC154A6NI56 674 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 F9P00740 461 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 URODP06132 367 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 CHRNA5P30532 468 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 AVPR1AP37288 418 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 PDK3Q15120 406 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 DCAF6Q58WW2 860 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 KYAT3Q6YP21 454 aaKnown RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 DENND5BQ6ZUT9 1274 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 MSL3Q8N5Y2 521 aaKnown RBP13.14□□□□□ -0.31
SMC4-202ENST00000357388 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
SMC4-202ENST00000357388 F5H5T6 163 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 NCAM2O15394 837 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 CRTAMO95727 393 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 CDC42P60953 191 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 PLIN5Q00G26 463 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 OTUD3Q5T2D3 398 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 FBXO25Q8TCJ0 367 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 PRCCQ92733 491 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 C8orf4Q9NR00 106 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 GSAPA4D1B5 854 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 HAT1O14929 419 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 SSNA1O43805 119 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ASS1P00966 412 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 NCAM1P13591 858 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 YWHAQP27348 245 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 FRG1Q14331 258 aaKnown RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 AAGABQ6PD74 315 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 NECAB2Q7Z6G3 386 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 TAF8Q7Z7C8 310 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 CCDC185Q8N715 623 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ZNF671Q8TAW3 534 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ZCWPW1Q9H0M4 648 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 PFDN2Q9UHV9 154 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 DDHD2O94830 711 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
SMC4-202ENST00000357388 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 TNK2Q07912 1038 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 ELOVL6Q9H5J4 265 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 FKBP14Q9NWM8 211 aa13.13□□□□□ -0.31
SMC4-202ENST00000357388 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms