RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PROS1P07225 676 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 KRT5P13647 590 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 POLR2EP19388 210 aaKnown RBP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 MAOBP27338 520 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 TBX4P57082 545 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 SIM1P81133 766 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 SLC14A1Q13336 389 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 AHI1Q8N157 1196 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 SORCS1Q8WY21 1168 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 TFAP2BQ92481 460 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 HSFY1Q96LI6 401 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 MIS12Q9H081 205 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 USP36Q9P275 1121 aaKnown RBP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 SUN2Q9UH99 717 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 STOML2Q9UJZ1 356 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 CLEC4EQ9ULY5 219 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPN3-204ENST00000356316 FRYQ5TBA9 3013 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 CNOT1A5YKK6 2376 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 A0A1B0GTW7 788 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 SPAARA0A1B0GVQ0 90 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 H0Y626 953 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 CAPN9O14815 690 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 MED7O43513 233 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 TBL1XO60907 577 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 TRIM16O95361 564 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 AFPP02771 609 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 LTFP02788 710 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 PRKCHP24723 683 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 HOXD9P28356 352 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 HLA-FP30511 346 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 ST8SIA6P61647 398 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 GCNT1Q02742 428 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 RING1Q06587 406 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 MPP7Q5T2T1 576 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 DCAF12L1Q5VU92 463 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 MSANTD2Q6P1R3 559 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 FOXR2Q6PJQ5 311 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 FAM124AQ86V42 546 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 CACUL1Q86Y37 369 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 UBR7Q8N806 425 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 RBBP8NLQ8NC74 664 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 OR2T3Q8NH03 318 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 CYB5D2Q8WUJ1 264 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 DNASE2BQ8WZ79 361 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 TRIM62Q9BVG3 475 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 ABCB8Q9NUT2 735 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 NFE2L3Q9Y4A8 694 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-204ENST00000356316 ACACBO00763 2458 aa11.09□□□□□ -0.63
CAPN3-204ENST00000356316 KCNJ18B7U540 433 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 BIN1O00499 593 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 BCAT2O15382 392 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 ACSL4O60488 711 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 DNTTP04053 509 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PABPC1P11940 636 aaKnown RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 HLA-EP13747 358 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 SPINK2P20155 84 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 ACADSBP45954 432 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 COPAP53621 1224 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 STX17P56962 302 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PAK1Q13153 545 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 CAMK2GQ13555 558 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 TRIP6Q15654 476 aaKnown RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 MBLAC2Q68D91 279 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 IL27RAQ6UWB1 636 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 PIP4P1Q86T03 277 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 ADIPOR2Q86V24 386 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
CAPN3-204ENST00000356316 OR2I1PQ8NGU4 316 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 SNX19Q92543 992 aa11.08□□□□□ -0.64
CAPN3-204ENST00000356316 FAM149B1Q96BN6 582 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms