RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 FUT2Q10981 343 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 TMEM63BQ5T3F8 832 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 MROH9Q5TGP6 573 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3GQ6DHY5 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3CQ6IPX1 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3Q8IZP1 549 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 CNPY4Q8N129 248 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 C3orf20Q8ND61 904 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 DNAJC7Q99615 494 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TACO1Q9BSH4 297 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 DUSP16Q9BY84 665 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ASPSCR1Q9BZE9 553 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 IARS2Q9NSE4 1012 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 SCN11AQ9UI33 1791 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 FGF10O15520 208 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 HTR1BP28222 390 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 MBTD1Q05BQ5 628 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 IFT88Q13099 833 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ECM1Q16610 540 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 INSCQ1MX18 579 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZNF792Q3KQV3 632 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 FAM183BPQ6ZVS7 135 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 GLT6D1Q7Z4J2 308 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 LMNTD2Q8IXW0 634 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 BSNDQ8WZ55 320 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 OR8D1Q8WZ84 308 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZYG11BQ9C0D3 744 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 SFMBT1Q9UHJ3 866 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 RNF112Q9ULX5 631 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 PCDHB9Q9Y5E1 797 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZNF536O15090 1300 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 CLASP2O75122 1294 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 C22orf31O95567 290 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 SNRPAP09012 282 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 TPH1P17752 444 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 PURAQ00577 322 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 KYNUQ16719 465 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 C15orf59Q2T9L4 293 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZACNQ401N2 412 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 NT5DC1Q5TFE4 455 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 FAM84AQ96KN4 292 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TRIM15Q9C019 465 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 RBM12Q9NTZ6 932 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 PSMC3IPQ9P2W1 217 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 SHOC2Q9UQ13 582 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 PDE2AO00408 941 aaPredicted RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 RFC2P35250 354 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 LRRC74AQ0VAA2 488 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 LRRC14Q15048 493 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 LDLRAD1Q5T700 205 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 COG1Q8WTW3 980 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 TEPSINQ96N21 525 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 FAM167BQ9BTA0 163 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 WDR41Q9HAD4 459 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 DUS2Q9NX74 493 aaKnown RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 A0A0A6YYK5 440 aaPredicted RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 ATP8B1O43520 1251 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 ZNF862O60290 1169 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 MARSP56192 900 aaKnown RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 IL17AQ16552 155 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 TRMT10CQ7L0Y3 403 aaKnown RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 SPATA20Q8TB22 786 aa9.96□□□□□ -0.81
GABPA-201ENST00000354828 ELAC2Q9BQ52 826 aaKnown RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.81
GABPA-201ENST00000354828 PSMD12O00232 456 aaPredicted RBP9.96□□□□□ -0.82
GABPA-201ENST00000354828 RFX3P48380 749 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 C1QTNF8P60827 252 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 FAM133BQ5BKY9 247 aaKnown RBP9.96□□□□□ -0.82
GABPA-201ENST00000354828 CDKAL1Q5VV42 579 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 OTOAQ7RTW8 1153 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 CCNJLQ8IV13 435 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 SYTL1Q8IYJ3 562 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 KLF6Q99612 283 aaPredicted RBP9.96□□□□□ -0.82
GABPA-201ENST00000354828 CNGB3Q9NQW8 809 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 NMRK1Q9NWW6 199 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 FAM153AQ9UHL3 310 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 CASZ1Q86V15 1759 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 CRYBG1Q9Y4K1 1723 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 ARIH2O95376 493 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 ZNF7P17097 686 aaPredicted RBP9.96□□□□□ -0.82
GABPA-201ENST00000354828 KRT4P19013 534 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 KCNA3P22001 575 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 CLCN6P51797 869 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 GJA9P57773 515 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 JAG1P78504 1218 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 HPCAP84074 193 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 MUM1Q2TAK8 710 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 AGAP9Q5VTM2 703 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 RAET1GQ6H3X3 334 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 HTR3CQ8WXA8 447 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 TEX12Q9BXU0 123 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 ATP13A3Q9H7F0 1226 aa9.96□□□□□ -0.82
GABPA-201ENST00000354828 GMIPQ9P107 970 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms