RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 TTC31Q49AM3 519 aaPredicted RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 ATL3Q6DD88 541 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 DENND1CQ8IV53 801 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 DCBLD1Q8N8Z6 715 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 TTC9Q92623 222 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 SYAP1Q96A49 352 aaPredicted RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 MED8Q96G25 268 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 ZNF578Q96N58 590 aaPredicted RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 CGRRF1Q99675 332 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 DCLK3Q9C098 648 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 XYLT2Q9H1B5 865 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 TMEM245Q9H330 911 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 CSNK1G1Q9HCP0 422 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 PRSS16Q9NQE7 514 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 FAM49BQ9NUQ9 324 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 RASAL2Q9UJF2 1139 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 AGO1Q9UL18 857 aaKnown RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 YKT6O15498 198 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 MT-CO3P00414 261 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 MPOP05164 745 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 CD38P28907 300 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 ADORA2BP29275 332 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 EPHA8P29322 1005 aaPredicted RBP16.59■□□□□ 0.25
DDX55-202ENST00000354291 ATICP31939 592 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 COG7P83436 770 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
DDX55-202ENST00000354291 CNNM4Q6P4Q7 775 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 TADA2BQ86TJ2 420 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 CACTIN-AS1Q8N1I8 211 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 C12orf29Q8N999 325 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
DDX55-202ENST00000354291 DHX58Q96C10 678 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 SLC2A11Q9BYW1 496 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 TRIM4Q9C037 500 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 EBF2Q9HAK2 575 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 MAGEF1Q9HAY2 307 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 IL17BQ9UHF5 180 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 ADAMTS1Q9UHI8 967 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 PCDHB1Q9Y5F3 818 aa16.59■□□□□ 0.25
DDX55-202ENST00000354291 CKAP5Q14008 2032 aa16.58■□□□□ 0.25
DDX55-202ENST00000354291 WNT9AO14904 365 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
DDX55-202ENST00000354291 F13A1P00488 732 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 FAM200BP0CF97 657 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 RALAP11233 206 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 GALCP54803 685 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 ASIC1P78348 528 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 VAC14Q08AM6 782 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 EFEMP1Q12805 493 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 PSMD6Q15008 389 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 ZNF667Q5HYK9 610 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 NCEH1Q6PIU2 408 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 KCNE4Q8WWG9 221 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 RFFLQ8WZ73 363 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 HPS3Q969F9 1004 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 HIC2Q96JB3 615 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 SDCBP2Q9H190 292 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 FBXL12Q9NXK8 326 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 CFAP45Q9UL16 551 aa16.58■□□□□ 0.24
DDX55-202ENST00000354291 COL5A1P20908 1838 aaPredicted RBP16.58■□□□□ 0.24
DDX55-202ENST00000354291 BOD1L1Q8NFC6 3051 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 CLIC2O15247 247 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX55-202ENST00000354291 ME1P48163 572 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 CYP2J2P51589 502 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 E2F1Q01094 437 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 CYP24A1Q07973 514 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 BIRC3Q13489 604 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 ZNF699Q32M78 642 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
DDX55-202ENST00000354291 KIAA1614Q5VZ46 1190 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 ZNF776Q68DI1 518 aaPredicted RBP16.57■□□□□ 0.24
DDX55-202ENST00000354291 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
DDX55-202ENST00000354291 CHST9Q7L1S5 443 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 SCD5Q86SK9 330 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 GOLGA1Q92805 767 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 C7orf25Q9BPX7 421 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX55-202ENST00000354291 MTG2Q9H4K7 406 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 FBRSQ9HAH7 460 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 FAM13BQ9NYF5 915 aa16.57■□□□□ 0.24
DDX55-202ENST00000354291 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
DDX55-202ENST00000354291 ARID1BQ8NFD5 2236 aaPredicted RBP16.56■□□□□ 0.24
DDX55-202ENST00000354291 HHLA1C9JL84 531 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 TLR4O00206 839 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
DDX55-202ENST00000354291 KIF20AO95235 890 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 NDST1P52848 882 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 GABREP78334 506 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 COLEC12Q5KU26 742 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 LSMEM2Q8N112 164 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 FAM117AQ9C073 453 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 SUN2Q9UH99 717 aa16.56■□□□□ 0.24
DDX55-202ENST00000354291 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms