RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RINLQ6ZS11 566 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 KRT27Q7Z3Y8 459 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TRABD2AQ86V40 505 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SPARTQ8N0X7 666 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 VPS52Q8N1B4 723 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 LENG8Q96PV6 779 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TREX2Q9BQ50 279 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SCNM1Q9BWG6 230 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CD320Q9NPF0 282 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 NSMCE4AQ9NXX6 385 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC12A4Q9UP95 1085 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FAM237BA0A1B0GVD1 139 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 A0A1W2PQF6 199 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AQP7P3A6NL99 342 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FFAR3O14843 346 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 DKC1O60832 514 aaKnown RBP eCLIP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 USP12O75317 370 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PDE8BO95263 885 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MYCLP12524 364 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PI3P19957 117 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PRKCHP24723 683 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TLX1P31314 330 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC5A2P31639 672 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MCM5P33992 734 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PTH1RQ03431 593 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PTP4A2Q12974 167 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 RUNX2Q13950 521 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ANKRD1Q15327 319 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 BAK1Q16611 211 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AAK1Q2M2I8 961 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FAM102AQ5T9C2 384 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TTLL5Q6EMB2 1281 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ANO7Q6IWH7 933 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 INTS5Q6P9B9 1019 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC15A3Q8IY34 581 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 OR56A1Q8NGH5 318 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 POC1BQ8TC44 478 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C2CD4CQ8TF44 421 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 NACC2Q96BF6 587 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 NSUN4Q96CB9 384 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SMOQ99835 787 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ELOVL1Q9BW60 279 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C12orf65Q9H3J6 166 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GRPEL1Q9HAV7 217 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ATP8A2Q9NTI2 1148 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 LIN7CQ9NUP9 197 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC25A10Q9UBX3 287 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 HSPB7Q9UBY9 170 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 KDM3AQ9Y4C1 1321 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PABPN1LA6NDY0 278 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 B5MCH6 92 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 F5H0A9 414 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PSMD10O75832 226 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 OR2C1O95371 312 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RPL13P26373 211 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TNNT3P45378 269 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 RIPPLY3P57055 190 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TAS2R50P59544 299 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 UFM1P61960 85 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NHLH2Q02577 135 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CDK18Q07002 472 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CSHL1Q14406 222 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NAA25Q14CX7 972 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SEC23BQ15437 767 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 DUSP28Q4G0W2 176 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CBWD5Q5RIA9 395 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 FAM90A2PQ658T7 463 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 GALNTL5Q7Z4T8 443 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADGRG6Q86SQ4 1221 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 AACSQ86V21 672 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ZSWIM9Q86XI8 627 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 KBTBD2Q8IY47 623 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CARNMT1Q8N4J0 409 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 LRRC71Q8N4P6 559 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NLGN4YQ8NFZ3 816 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 MBD3L2Q8NHZ7 208 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ABHD5Q8WTS1 349 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 VPS33AQ96AX1 596 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 REXO5Q96IC2 774 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 AJUBAQ96IF1 538 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 KLHL15Q96M94 604 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 TTPALQ9BTX7 342 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 COQ3Q9NZJ6 369 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 NDUFAF4Q9P032 175 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 DKK3Q9UBP4 350 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADAM29Q9UKF5 820 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 DRG1Q9Y295 367 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 GDAQ9Y2T3 454 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PTRH2Q9Y3E5 179 aaKnown RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ADAM18Q9Y3Q7 739 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CAPN7Q9Y6W3 813 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 FAM169AQ9Y6X4 670 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SOS1Q07889 1333 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 CICQ96RK0 1608 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SH2D7A6NKC9 451 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-202ENST00000354071 ANP32CO43423 234 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 SPRY2O43597 315 aa1.78□□□□□ -2.12
BRCA1-202ENST00000354071 PRAMEF2O60811 474 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms