RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FDFT1P37268 417 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 ERFP50548 548 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 NAB1Q13506 487 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 HIC1Q14526 733 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 AAGABQ6PD74 315 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 SHKBP1Q8TBC3 707 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 CNKSR2Q8WXI2 1034 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 SPATA13Q96N96 652 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 PDP2Q9P2J9 529 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 USP3Q9Y6I4 520 aa25.26■■□□□ 1.63
CPNE1-202ENST00000352393 USP1O94782 785 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 KLHL2O95198 593 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 SERPINE1P05121 402 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 PDE1BQ01064 536 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 CDC16Q13042 620 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 ZNF484Q5JVG2 852 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 SLC25A41Q8N5S1 370 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 HTR3CQ8WXA8 447 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 KIF12Q96FN5 646 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 SORT1Q99523 831 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 TTC1Q99614 292 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 ERAP1Q9NZ08 941 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 MFHAS1Q9Y4C4 1052 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 INSRRP14616 1297 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 ALOX15P16050 662 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-202ENST00000352393 KCNA4P22459 653 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 CALRP27797 417 aaKnown RBP25.25■■□□□ 1.63
CPNE1-202ENST00000352393 SNX16P57768 344 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 LRRC8BQ6P9F7 803 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 SLC26A9Q7LBE3 791 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 GSTCDQ8NEC7 633 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 CLEC4CQ8WTT0 213 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 CDKL2Q92772 493 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 PPP1R12CQ9BZL4 782 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 EIF2B3Q9NR50 452 aaKnown RBP25.25■■□□□ 1.63
CPNE1-202ENST00000352393 PAPOLBQ9NRJ5 636 aaKnown RBP25.25■■□□□ 1.63
CPNE1-202ENST00000352393 DNAJC28Q9NX36 388 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 NR2E3Q9Y5X4 410 aa25.25■■□□□ 1.63
CPNE1-202ENST00000352393 CCNT2O60583 730 aaKnown RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 PROCP04070 461 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 PAPOLAP51003 745 aaKnown RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 CRADDP78560 199 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 SLC25A3Q00325 362 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 EFHC1Q5JVL4 640 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 ATG14Q6ZNE5 492 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 CCDC185Q8N715 623 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 TFB1MQ8WVM0 346 aaKnown RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 CLMNQ96JQ2 1002 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 SH3GL3Q99963 347 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 DCDC2Q9UHG0 476 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 APOBEC2Q9Y235 224 aaKnown RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 HACD1B0YJ81 288 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 TSPAN1O60635 241 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 SIN3BO75182 1162 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 LYNP07948 512 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 TXNP10599 105 aaKnown RBP25.24■■□□□ 1.63
CPNE1-202ENST00000352393 PGAM1P18669 254 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 DPY19L2Q6NUT2 758 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 CASC4Q6P4E1 433 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 ARNTL2Q8WYA1 636 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 S100A14Q9HCY8 104 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 PSAT1Q9Y617 370 aa25.24■■□□□ 1.63
CPNE1-202ENST00000352393 DNAJC25-GNG10A0A024R161 153 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 UBTFL6P0CB48 400 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-202ENST00000352393 COPAP53621 1224 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 BTKQ06187 659 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 GADL1Q6ZQY3 521 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 HACE1Q8IYU2 909 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 GALNT15Q8N3T1 639 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 ATP2A3Q93084 1043 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 FAM96AQ9H5X1 160 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 AKT3Q9Y243 479 aa25.23■■□□□ 1.63
CPNE1-202ENST00000352393 MYO18AQ92614 2054 aaKnown RBP25.23■■□□□ 1.63
CPNE1-202ENST00000352393 POLR2AP24928 1970 aaKnown RBP25.23■■□□□ 1.63
CPNE1-202ENST00000352393 BAG2O95816 211 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 ITGA2BP08514 1039 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 GRK2P25098 689 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 MGAT1P26572 445 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 ARRB2P32121 409 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 SCNN1AP37088 669 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 IDH3AP50213 366 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 ARHGAP17Q68EM7 881 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 RAPH1Q70E73 1250 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 CCNJLQ8IV13 435 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 SNX9Q9Y5X1 595 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 LTBP3Q9NS15 1303 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 F5H423 210 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-202ENST00000352393 ZNF195O14628 629 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 PPEF2O14830 753 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 CLGNO14967 610 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 SLC25A27O95847 323 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 VTNP04004 478 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 MYL4P12829 197 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 HNRNPDQ14103 355 aaKnown RBP25.22■■□□□ 1.63
CPNE1-202ENST00000352393 INSCQ1MX18 579 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 SOWAHAQ2M3V2 549 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 CWF19L1Q69YN2 538 aaKnown RBP25.22■■□□□ 1.63
CPNE1-202ENST00000352393 PGM2L1Q6PCE3 622 aa25.22■■□□□ 1.63
CPNE1-202ENST00000352393 C10orf107Q8IVU9 208 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms