RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 C5P01031 1676 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 NCAM2O15394 837 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MAXP61244 160 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MRPS5P82675 430 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 PLIN5Q00G26 463 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 MPP3Q13368 585 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 CSHL1Q14406 222 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 PDCD2Q16342 344 aaPredicted RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 FAM83EQ2M2I3 478 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMC6-201ENST00000351948 AGBL2Q5U5Z8 902 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 RD3Q7Z3Z2 195 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 CFAP52Q8N1V2 620 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 YIPF2Q9BWQ6 316 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 APOBEC3GQ9HC16 384 aaKnown RBP14.07□□□□□ -0.16
SMC6-201ENST00000351948 MSRAQ9UJ68 235 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 L1RE1Q9UN81 338 aa14.07□□□□□ -0.16
SMC6-201ENST00000351948 SOAT2O75908 522 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PIRTP0C851 137 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 LMO2P25791 158 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 CALRP27797 417 aaKnown RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 FLT3P36888 993 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 CPA2P48052 419 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 TLE2Q04725 743 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ZNF618Q5T7W0 954 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ZNF473Q8WTR7 871 aaKnown RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 ALG3Q92685 438 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 CLCA2Q9UQC9 943 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 TBC1D3BA6NDS4 549 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 DNALI1O14645 258 aaPredicted RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 RNASEH1O60930 286 aaKnown RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 TMCC1O94876 653 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 MT-CO1P00395 513 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PYGBP11216 843 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 SYN1P17600 705 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PSMB4P28070 264 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PBX1P40424 430 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 BTKQ06187 659 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PHF13Q86YI8 300 aaPredicted RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 MAB21L3Q8N8X9 362 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ADGRE3Q9BY15 652 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 MANSC1Q9H8J5 431 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 NSMCE4AQ9NXX6 385 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 GABRR2P28476 465 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 TAF10Q12962 218 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 GDF6Q6KF10 455 aaPredicted RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 LAYNQ6UX15 382 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ERP27Q96DN0 273 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 CLPBQ9H078 707 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 EPN3Q9H201 632 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 FAM96AQ9H5X1 160 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 IL1RL2Q9HB29 575 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 WWOXQ9NZC7 414 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 UBA2Q9UBT2 640 aaPredicted RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 DNMT3LQ9UJW3 386 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 TELO2Q9Y4R8 837 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ERI2A8K979 691 aaKnown RBP14.06□□□□□ -0.16
SMC6-201ENST00000351948 IGF2BP3O00425 579 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMC6-201ENST00000351948 MAP3K7O43318 606 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 CILPO75339 1184 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 BANF1O75531 89 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ADH1AP07327 375 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 LILRA4P59901 499 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 POU4F1Q01851 419 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 DMTNQ08495 405 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 ZNF284Q2VY69 593 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 RAB42Q8N4Z0 105 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 TOP6BLQ8N6T0 577 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 SERPINB12Q96P63 405 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
SMC6-201ENST00000351948 STMN1P16949 149 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 PABPC1LQ4VXU2 614 aaKnown RBP14.05□□□□□ -0.16
SMC6-201ENST00000351948 KCNV2Q8TDN2 545 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 COG4Q9H9E3 785 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 C4BP0C0L5 1744 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 E2F6O75461 281 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 CRTAMO95727 393 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 GLP2RO95838 553 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 ENO3P13929 434 aaPredicted RBP14.05□□□□□ -0.16
SMC6-201ENST00000351948 ITGALP20701 1170 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 CDH17Q12864 832 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 TFAP2BQ92481 460 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 PKD2L2Q9NZM6 624 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 MMP13P45452 471 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 USP13Q92995 863 aaPredicted RBP14.05□□□□□ -0.16
SMC6-201ENST00000351948 GPAMQ9HCL2 828 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 MYBPHLA2RUH7 354 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 EIF3HO15372 352 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■□□ 15.9
SMC6-201ENST00000351948 ERCC2P18074 760 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 MZF1P28698 734 aaPredicted RBP14.05□□□□□ -0.16
SMC6-201ENST00000351948 DPYSL3Q14195 570 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 TAF5Q15542 800 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 NAT16Q8N8M0 369 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 PIP4K2CQ8TBX8 421 aa14.05□□□□□ -0.16
SMC6-201ENST00000351948 HNRNPLLQ8WVV9 542 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms