RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MX2P20592 715 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TGM1P22735 817 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 NMT1P30419 496 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 GNG2P59768 71 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 MS4A2Q01362 244 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 FAAP100Q0VG06 881 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 SNAP47Q5SQN1 464 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 POLNQ7Z5Q5 900 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 GLRX5Q86SX6 157 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 BEND7Q8N7W2 519 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TMEM102Q8N9M5 508 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 ALKBH8Q96BT7 664 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 C8orf48Q96LL4 319 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TMEM260Q9NX78 707 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 SNTG2Q9NY99 539 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TAF1P21675 1872 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 DNALI1O14645 258 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 NUAK1O60285 661 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 LYPLA1O75608 230 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 GH2P01242 217 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 IL1BP01584 269 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 KRT18P05783 430 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CDH1P12830 882 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 NCF2P19878 526 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 RPS8P62241 208 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CENPCQ03188 943 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 KCNA1Q09470 495 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 IKBKEQ14164 716 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 PTK2BQ14289 1009 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TRIM71Q2Q1W2 868 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CBWD6Q4V339 395 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 TEX44Q53QW1 395 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CBWD3Q5JTY5 395 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CBWD5Q5RIA9 395 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 PIWIL3Q7Z3Z3 882 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 DCP2Q8IU60 420 aaKnown RBP10.94□□□□□ -0.66
CAPN3-203ENST00000349748 LSMEM2Q8N112 164 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 NEDD1Q8NHV4 660 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 FIG4Q92562 907 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 PEX13Q92968 403 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 KLHL32Q96NJ5 620 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 CLSTN3Q9BQT9 956 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 DGKBQ9Y6T7 804 aa10.94□□□□□ -0.66
CAPN3-203ENST00000349748 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 KLF11O14901 512 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 TRIM49P0CI25 452 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 TRIM49CP0CI26 452 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 GJC1P36383 396 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 ARSEP51690 589 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 CDK18Q07002 472 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 NPTX1Q15818 432 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 TMEM119Q4V9L6 283 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 VWA5B1Q5TIE3 1220 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 USP13Q92995 863 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 FAM20AQ96MK3 541 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 MTG1Q9BT17 334 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 C1orf50Q9BV19 199 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 MRPL9Q9BYD2 267 aaKnown RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 SLC13A1Q9BZW2 595 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 GIMAP4Q9NUV9 329 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 UCKL1Q9NWZ5 548 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 AIM2O14862 343 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 HAT1O14929 419 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 SPAG6O75602 509 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 NR3C1P04150 777 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 FDX1P10109 184 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 CCNA2P20248 432 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 HMGB2P26583 209 aaKnown RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 S100A5P33763 92 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 HADHAP40939 763 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 MAPRE1Q15691 268 aaKnown RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 TOR1AIP2Q8NFQ8 470 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF420Q8TAQ5 688 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF597Q96LX8 424 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 MTMR9Q96QG7 549 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 MOV10Q9HCE1 1003 aaKnown RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 TRIM39Q9HCM9 518 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 AVENQ9NQS1 362 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-203ENST00000349748 NDFIP2Q9NV92 336 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 STK39Q9UEW8 545 aa10.93□□□□□ -0.66
CAPN3-203ENST00000349748 PCP4L1A6NKN8 68 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SYCE1LA8MT33 242 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 COPEO14579 308 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TOR1BO14657 336 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 IDH3BO43837 385 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 FAM155BO75949 473 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms