RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ODF2Q5BJF6 829 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 TFDP3Q5H9I0 405 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 PPP6R3Q5H9R7 873 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-202ENST00000348495 SEL1L2Q5TEA6 688 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 FAM72AQ5TYM5 149 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 PIK3R6Q5UE93 754 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 FAM72DQ6L9T8 149 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 FAM72BQ86X60 149 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 NPAS3Q8IXF0 933 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 ACTRT1Q8TDG2 376 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 FAF2Q96CS3 445 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 HERPUD2Q9BSE4 406 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 SLITRK6Q9H5Y7 841 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 RCOR3Q9P2K3 495 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-202ENST00000348495 SNX10Q9Y5X0 201 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 HS3ST4Q9Y661 456 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 hCG_1818297A0A087WSY0 165 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 MS4A13Q5J8X5 152 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 EP400NLQ6ZTU2 488 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 SMRP1Q8NCR6 262 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 USP13Q92995 863 aaPredicted RBP28.01■■■□□ 2.07
SSBP4-202ENST00000348495 CALN1Q9BXU9 219 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 OSBPL8Q9BZF1 889 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 SMG9Q9H0W8 520 aaKnown RBP28.01■■■□□ 2.07
SSBP4-202ENST00000348495 L2HGDHQ9H9P8 463 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 CWC15Q9P013 229 aaKnown RBP28.01■■■□□ 2.07
SSBP4-202ENST00000348495 EFR3BQ9Y2G0 817 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 IRF1P10914 325 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 CORO1AP31146 461 aaKnown RBP28.01■■■□□ 2.07
SSBP4-202ENST00000348495 MMRN1Q13201 1228 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 NADSYN1Q6IA69 706 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 CAPZA3Q96KX2 299 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 PRMT1Q99873 361 aaKnown RBP28.01■■■□□ 2.07
SSBP4-202ENST00000348495 RNF14Q9UBS8 474 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 CCL26Q9Y258 94 aa28.01■■■□□ 2.07
SSBP4-202ENST00000348495 BRWD1Q9NSI6 2320 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 PDE2AO00408 941 aaPredicted RBP28■■■□□ 2.07
SSBP4-202ENST00000348495 ZNF135P52742 658 aaPredicted RBP28■■■□□ 2.07
SSBP4-202ENST00000348495 ACBD5Q5T8D3 534 aaPredicted RBP28■■■□□ 2.07
SSBP4-202ENST00000348495 MANEALQ5VSG8 457 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 Q6ZNB5 142 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 SLC13A5Q86YT5 568 aaPredicted RBP28■■■□□ 2.07
SSBP4-202ENST00000348495 DEFB123Q8N688 67 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 FGF13Q92913 245 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 RIPOR3Q96MK2 946 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 CSPG4P5Q96PW8 444 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 SIK2Q9H0K1 926 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 TDP1Q9NUW8 608 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 STOML2Q9UJZ1 356 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 AGO1Q9UL18 857 aaKnown RBP28■■■□□ 2.07
SSBP4-202ENST00000348495 NEU3Q9UQ49 428 aa28■■■□□ 2.07
SSBP4-202ENST00000348495 LEFTY2O00292 366 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 ACSL4O60488 711 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 PRAMEF12O95522 483 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 LATS1O95835 1130 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 FGGP02679 453 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 KRT10P13645 584 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 TCF3P15923 654 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 GOT1P17174 413 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 GGCXP38435 758 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 CETN2P41208 172 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 HCAR3P49019 387 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 LLGL1Q15334 1064 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 WHAMMP3Q1A5X7 153 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 ANKRD20A8PQ5CZ79 823 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 DENND1CQ8IV53 801 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 ZNF683Q8IZ20 524 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 DCLK3Q9C098 648 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 GDE1Q9NZC3 331 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 SMARCAL1Q9NZC9 954 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 CFAP97Q9P2B7 532 aa27.99■■■□□ 2.07
SSBP4-202ENST00000348495 NUP210Q8TEM1 1887 aaPredicted RBP27.99■■■□□ 2.07
SSBP4-202ENST00000348495 PGRMC1O00264 195 aaKnown RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 LRIG2O94898 1065 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 SLC11A2P49281 568 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 ADCY2Q08462 1091 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 KLF1Q13351 362 aaPredicted RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 HTR3DQ70Z44 454 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 GET4Q7L5D6 327 aaPredicted RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 DDX42Q86XP3 938 aaKnown RBP eCLIP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 ARID3BQ8IVW6 561 aaPredicted RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 ZSCAN18Q8TBC5 510 aaPredicted RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 SH3RF2Q8TEC5 729 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 RNF157Q96PX1 679 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 EPAS1Q99814 870 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 HEMGNQ9BXL5 484 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 DENND4AQ7Z401 1863 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 H3BRJ5 948 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 CREB3O43889 395 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 ARL4AP40617 200 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 MTHFRP42898 656 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 DPYSQ14117 519 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 FAM133BQ5BKY9 247 aaKnown RBP27.98■■■□□ 2.07
SSBP4-202ENST00000348495 C14orf80Q86SX3 495 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 PCDH19Q8TAB3 1148 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 RIN3Q8TB24 985 aa27.98■■■□□ 2.07
SSBP4-202ENST00000348495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.97■■■□□ 2.07
SSBP4-202ENST00000348495 TCRBV7S2A1N4TA0A589 114 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 EEF2KO00418 725 aaKnown RBP27.97■■■□□ 2.07
SSBP4-202ENST00000348495 HOXC13P31276 330 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms