RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 A0A1W2PQC6 194 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 HOXC11O43248 304 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 MAFKO60675 156 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SOCS5O75159 536 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 VNN1O95497 513 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 CRTAMO95727 393 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 CST3P01034 146 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TNNC2P02585 160 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ITGAVP06756 1048 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 THP07101 528 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 OSMP13725 252 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 RHOQP17081 205 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 NOP2P46087 812 aaKnown RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 MXI1P50539 228 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SCNN1GP51170 649 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TFAMQ00059 246 aaKnown RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SGCGQ13326 291 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ANKDD1AQ495B1 522 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 EPC2Q52LR7 807 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 NOMO2Q5JPE7 1267 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 GLRA4Q5JXX5 417 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SCARA3Q6AZY7 606 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 DPY19L2P1Q6NXN4 242 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 NPNTQ6UXI9 565 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TRAPPC11Q7Z392 1133 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 NUP93Q8N1F7 819 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM130Q8N3G9 435 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 FAM160A2Q8N612 972 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 EHBP1Q8NDI1 1231 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 BEST2Q8NFU1 509 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 LMO3Q8TAP4 145 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 GRIN3AQ8TCU5 1115 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 GDPD5Q8WTR4 605 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ZUFSPQ96AP4 578 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 C18orf25Q96B23 403 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TRIM11Q96F44 468 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TMEM169Q96HH4 297 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 FAM84AQ96KN4 292 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 CNDP2Q96KP4 475 aaKnown RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ERGIC2Q96RQ1 377 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 CDX2Q99626 313 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 AARSD1Q9BTE6 412 aaKnown RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 MMRN2Q9H8L6 949 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SLC38A7Q9NVC3 462 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 DPP3Q9NY33 737 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 CACNG4Q9UBN1 327 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TUBGCP4Q9UGJ1 667 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 PCOLCE2Q9UKZ9 415 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 UBQLN1Q9UMX0 589 aaKnown RBP5.4□□□□□ -1.54
VCAM1-202ENST00000347652 PLAGL2Q9UPG8 496 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 SIK3Q9Y2K2 1263 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 ATG2AQ2TAZ0 1938 aa5.4□□□□□ -1.54
VCAM1-202ENST00000347652 TRIOO75962 3097 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 PDCD11Q14690 1871 aaKnown RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TBKBP1A7MCY6 615 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 KHNYNO15037 678 aaKnown RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ADCY5O95622 1261 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 POMCP01189 267 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TPM3P06753 285 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TMEM191BP0C7N4 346 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ESRRAP11474 423 aaPredicted RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 LRPAP1P30533 357 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ACSL1P33121 698 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 IGFALSP35858 605 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 MYL7Q01449 175 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 SOX4Q06945 474 aaPredicted RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 GRIK3Q13003 919 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ERV3-1Q14264 604 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 NAA25Q14CX7 972 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TEAD4Q15561 434 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 RAB30Q15771 203 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TSTQ16762 297 aaKnown RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 SPRED3Q2MJR0 410 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ARL13BQ3SXY8 428 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 GLB1LQ6UWU2 654 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 GBP6Q6ZN66 633 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 C19orf47Q8N9M1 422 aaKnown RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 FBXL13Q8NEE6 735 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 MOSPD2Q8NHP6 518 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 URGCPQ8TCY9 931 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 STK35Q8TDR2 534 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TAS1R2Q8TE23 839 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 SEMA4DQ92854 862 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 NECAB3Q96P71 396 aaPredicted RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 DDX23Q9BUQ8 820 aaKnown RBP5.4□□□□□ -1.55
VCAM1-202ENST00000347652 MIR1-1HGQ9H1L0 117 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 CNTD2Q9H8S5 307 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 FAM204AQ9H8W3 233 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 RAB20Q9NX57 234 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 SIX4Q9UIU6 781 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 VPS28Q9UK41 221 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 ITGA11Q9UKX5 1188 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 INSL6Q9Y581 213 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 TRIP11Q15643 1979 aa5.4□□□□□ -1.55
VCAM1-202ENST00000347652 FAM25EA8MYX2 175 aa5.39□□□□□ -1.55
VCAM1-202ENST00000347652 F8W8V4 182 aa5.39□□□□□ -1.55
VCAM1-202ENST00000347652 PIRO00625 290 aa5.39□□□□□ -1.55
VCAM1-202ENST00000347652 ATXN7O15265 892 aaPredicted RBP5.39□□□□□ -1.55
VCAM1-202ENST00000347652 IRAK2O43187 625 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms