RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 MAP3K6O95382 1288 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 CSH1P0DML2 217 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 CSH2P0DML3 217 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 RBL1P28749 1068 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ACTN2P35609 894 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ALDH1A3P47895 512 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 TBX4P57082 545 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 FAM193AP78312 1265 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 MORF4L2Q15014 288 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 UAP1Q16222 522 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 HSP90B2PQ58FF3 399 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 SP7Q8TDD2 431 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC39A13Q96H72 371 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ZIM3Q96PE6 472 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 CDK5RAP1Q96SZ6 601 aaKnown RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ZBP1Q9H171 429 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 MFHAS1Q9Y4C4 1052 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 YIPF1Q9Y548 306 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 KCNU1A8MYU2 1149 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 PAGE1O75459 146 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ZNF189O75820 626 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 LRIG2O94898 1065 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 CTSAP10619 480 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 ELF1P32519 619 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 GGCXP38435 758 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 EFEMP1Q12805 493 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 RNASEH2BQ5TBB1 312 aaKnown RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 B4GALNT4Q76KP1 1039 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 TFB1MQ8WVM0 346 aaKnown RBP22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 AUTS2Q8WXX7 1259 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 RXFP1Q9HBX9 757 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 PAK5Q9P286 719 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 SHOC2Q9UQ13 582 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 SNX10Q9Y5X0 201 aa22.17■■□□□ 1.14
TSPAN3-202ENST00000346495 AGPSO00116 658 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 RRP9O43818 475 aaKnown RBP22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 LILRB3O75022 631 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 EPHB2P29323 1055 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 VEPH1Q14D04 833 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 PDK1Q15118 436 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 TRIP4Q15650 581 aaPredicted RBP22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 C10orf120Q5SQS8 335 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 LRIG3Q6UXM1 1119 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 C4orf22Q6V702 233 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 TADA2BQ86TJ2 420 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 CCDC25Q86WR0 208 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 ZNF276Q8N554 614 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 ZCCHC9Q8N567 271 aaKnown RBP22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 FCRL2Q96LA5 508 aaPredicted RBP22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 MTIF3Q9H2K0 278 aaKnown RBP22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 MARCH2Q9P0N8 246 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 PLAAQ9Y263 795 aa22.16■■□□□ 1.14
TSPAN3-202ENST00000346495 SMAPO00193 183 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 PRRG1O14668 218 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 PPP1R12AO14974 1030 aaPredicted RBP22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 OPA1O60313 960 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 APOEP02649 317 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 CHKAP35790 457 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 NRG1Q02297 640 aaPredicted RBP22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 SNX30Q5VWJ9 437 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 HEATR6Q6AI08 1181 aaKnown RBP22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 HOOK3Q86VS8 718 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 PPIL6Q8IXY8 311 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 KLHL23Q8NBE8 558 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 FERMT1Q9BQL6 677 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 HTATIP2Q9BUP3 242 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 SIK2Q9H0K1 926 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 PABPC3Q9H361 631 aaKnown RBP22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 SLC12A6Q9UHW9 1150 aa22.15■■□□□ 1.14
TSPAN3-202ENST00000346495 TEX28O15482 410 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 TLL1O43897 1013 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 ATP2A2P16615 1042 aaKnown RBP22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 SYN1P17600 705 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 SERPINB6P35237 376 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 KPNA1P52294 538 aaPredicted RBP22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 TRMT10CQ7L0Y3 403 aaKnown RBP22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 TCEAL8Q8IYN2 117 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 ATP6V0D2Q8N8Y2 350 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 C1orf74Q96LT6 269 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 MYRFLQ96LU7 910 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 PLXNA4Q9HCM2 1894 aa22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 FARP1Q9Y4F1 1045 aaPredicted RBP22.14■■□□□ 1.14
TSPAN3-202ENST00000346495 H3BQF6 201 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 NCAM2O15394 837 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 TLR5O60602 858 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 TBX18O95935 607 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 HMGA1P17096 107 aaKnown RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 OAS2P29728 719 aaKnown RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 HOXC13P31276 330 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 TAF12Q16514 161 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 MANEALQ5VSG8 457 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 GOLGA6L1Q8N7Z2 621 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 TBC1D31Q96DN5 1066 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 TRMT2BQ96GJ1 504 aaKnown RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 ZNF512Q96ME7 567 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 CATSPERBQ9H7T0 1116 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 SLC12A8A0AV02 714 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 C5orf60A6NFR6 353 aa22.13■■□□□ 1.13
TSPAN3-202ENST00000346495 FGF10O15520 208 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms