RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 UNC93AQ86WB7 457 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ENOX1Q8TC92 643 aaKnown RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 HCAR2Q8TDS4 363 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF578Q96N58 590 aaPredicted RBP7.63□□□□□ -1.19
ZNF540-202ENST00000343599 USP28Q96RU2 1077 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 SGK2Q9HBY8 427 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 GPR27Q9NS67 375 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 RMND1Q9NWS8 449 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 RHBDL2Q9NX52 303 aa7.63□□□□□ -1.19
ZNF540-202ENST00000343599 BIRC5O15392 142 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 ADH1CP00326 375 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PDGFBP01127 241 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 TROVE2P10155 538 aaKnown RBP eCLIP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CEBPBP17676 345 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 GRIA4P48058 902 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 ME1P48163 572 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 NEK2P51955 445 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 SLC12A1Q13621 1099 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 GAB4Q2WGN9 574 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CFAP58Q5T655 872 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 RHPN2Q8IUC4 686 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 BAP1Q92560 729 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 NXPE2Q96DL1 559 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 GAD1Q99259 594 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CEP72Q9P209 647 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 DMTF1Q9Y222 760 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 SPO11Q9Y5K1 396 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CSNK1G3Q9Y6M4 447 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PRRC2BQ5JSZ5 2229 aaKnown RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 TRAV19A0A0A6YYK7 116 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 MTMR11A4FU01 709 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CAPN9O14815 690 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 NARSO43776 548 aaKnown RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 B4GALT3O60512 393 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 MMEP08473 750 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 NCAM1P13591 858 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 KRT9P35527 623 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 GNALP38405 381 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 GAD2Q05329 585 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 TOB2Q14106 344 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 TRIM68Q6AZZ1 485 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 TMEM173Q86WV6 379 aaPredicted RBP7.62□□□□□ -1.19
ZNF540-202ENST00000343599 FAM181AQ8N9Y4 354 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CDT1Q9H211 546 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 CARD9Q9H257 536 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 HESX1Q9UBX0 185 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PCDHA12Q9UN75 941 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 ZNF148Q9UQR1 794 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 PCDHB5Q9Y5E4 795 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 COMMD3-BMI1R4GMX3 469 aa7.62□□□□□ -1.19
ZNF540-202ENST00000343599 HTR3EA5X5Y0 456 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 POTEMA6NI47 508 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CACNG3O60359 315 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 ASLP04424 464 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 GTF2H1P32780 548 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 LONP1P36776 959 aaKnown RBP7.61□□□□□ -1.19
ZNF540-202ENST00000343599 MAPK7Q13164 816 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 TRIP11Q15643 1979 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 BCL2A1Q16548 175 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CALCRLQ16602 461 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 TMEM53Q6P2H8 277 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 STXBP4Q6ZWJ1 553 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 ANKK1Q8NFD2 765 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CFAP61Q8NHU2 1237 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 NACC2Q96BF6 587 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 ZKSCAN3Q9BRR0 538 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CCDC28BQ9BUN5 200 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 TMBIM4Q9HC24 238 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 MIOSQ9NXC5 875 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 QPCTLQ9NXS2 382 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 ITM2BQ9Y287 266 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 A0A1B0GTW7 788 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 H3BQV1 296 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 IRAK2O43187 625 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 MFAP3LO75121 409 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 ATP2C2O75185 946 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 HMGA1P17096 107 aaKnown RBP7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CASP14P31944 242 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CA8P35219 290 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 PBX1P40424 430 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 SCNN1GP51170 649 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 NSUN2Q08J23 767 aaKnown RBP eCLIP7.61□□□□□ -1.19
ZNF540-202ENST00000343599 TMTC1Q8IUR5 882 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 GLYCTKQ8IVS8 523 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 RNF149Q8NC42 400 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CCDC197Q8NCU1 140 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 DEPTORQ8TB45 409 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 KIF12Q96FN5 646 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 VAT1LQ9HCJ6 419 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
ZNF540-202ENST00000343599 CLIC5Q9NZA1 410 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 SCOCQ9UIL1 159 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 RABL2BQ9UNT1 228 aa7.61□□□□□ -1.19
ZNF540-202ENST00000343599 R3HDM2Q9Y2K5 976 aaKnown RBP7.61□□□□□ -1.19
ZNF540-202ENST00000343599 OAS1P00973 400 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms