RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 NR5A2O00482 541 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ADCY6O43306 1168 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZNF682O95780 498 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SLC2A4P14672 509 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SERPINA4P29622 427 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 HTR3CQ8WXA8 447 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZBTB45Q96K62 511 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ABCC13Q9NSE7 274 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 NUDT5Q9UKK9 219 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 PIK3C2BO00750 1634 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 A0A0A6YYK5 440 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SLC6A3Q01959 620 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 GCNT1Q02742 428 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CREMQ03060 361 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZFPM1Q8IX07 1006 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 KIF2BQ8N4N8 673 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 MDM1Q8TC05 714 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 TKTL2Q9H0I9 626 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZDHHC6Q9H6R6 413 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ASAH2Q9NR71 780 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SF3B1O75533 1304 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SLCO1B7G3V0H7 640 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 CYLC2Q14093 348 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 PANX3Q96QZ0 392 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 UNKQ9C0B0 810 aaKnown RBP15.36■□□□□ 0.05
UBE3B-202ENST00000342494 RGS18Q9NS28 235 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 SEPT3Q9UH03 358 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 POLG2Q9UHN1 485 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
UBE3B-202ENST00000342494 ZNF23P17027 643 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 MRPS6P82932 125 aaKnown RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 SLC45A4Q5BKX6 768 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 ULBP1Q9BZM6 244 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 TAS2R13Q9NYV9 303 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 MRPL42Q9Y6G3 142 aaKnown RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 KATNA1O75449 491 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 FYNP06241 537 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 PCYT1AP49585 367 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 MMRN1Q13201 1228 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 TRIP4Q15650 581 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 ATAD3BQ5T9A4 648 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 UROC1Q96N76 676 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 TMEM51Q9NW97 253 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 DNAJC16Q9Y2G8 782 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 FRMPD4Q14CM0 1322 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 A8MX80 341 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 MAP2K5Q13163 448 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 USP45Q70EL2 814 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 COPS5Q92905 334 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 ELMO3Q96BJ8 720 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 IL17RAQ96F46 866 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 CORO1BQ9BR76 489 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 DUSP10Q9Y6W6 482 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 AGLP35573 1532 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 RARGP13631 454 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 KIAA1324Q6UXG2 1013 aaKnown RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 TRAPPC5Q8IUR0 188 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 CDK20Q8IZL9 346 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 FAM120BQ96EK7 910 aaKnown RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 C2orf49Q9BVC5 232 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 CAPN6Q9Y6Q1 641 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 MORC2Q9Y6X9 1032 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-202ENST00000342494 BCORL1Q5H9F3 1711 aa15.35■□□□□ 0.05
UBE3B-202ENST00000342494 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 ZNF839A8K0R7 811 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 DYNC1I2Q13409 638 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 BMPR2Q13873 1038 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 PCDH9Q9HC56 1237 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 HEY2Q9UBP5 337 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 CEP170BQ9Y4F5 1589 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 DAB2IPQ5VWQ8 1189 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 ARHGEF19Q8IW93 802 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 PPP1R14AQ96A00 147 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 APBA2Q99767 749 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 FTHL17Q9BXU8 183 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 COPG1Q9Y678 874 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 INO80Q9ULG1 1556 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 IGF2BP3O00425 579 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 BAIAP3O94812 1187 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 NR2C2P49116 596 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 MRPS15P82914 257 aaKnown RBP15.34■□□□□ 0.05
UBE3B-202ENST00000342494 ZNF544Q6NX49 715 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 FBXO39Q8N4B4 442 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 PHF21BQ96EK2 531 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 PRRG3Q9BZD7 231 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 HPSEQ9Y251 543 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 REREQ9P2R6 1566 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 E9PBE3 544 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 KCNK1O00180 336 aa15.34■□□□□ 0.05
UBE3B-202ENST00000342494 NUDT14O95848 222 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms