RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 GAD2Q05329 585 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 SPDYCQ5MJ68 293 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 NPWQ8N729 165 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 OR2W6PQ8NHA6 318 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 PRCCQ92733 491 aaPredicted RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 RNF34Q969K3 372 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 ZBP1Q9H171 429 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 ACBD3Q9H3P7 528 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 HSFX1Q9UBD0 423 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 NR2E3Q9Y5X4 410 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TCRBV7S3A2A0A539 114 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 FGF18O76093 207 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 URODP06132 367 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 DNAJB2P25686 324 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 CCR1P32246 355 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 PPM1AP35813 382 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TUFMP49411 452 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 EFEMP1Q12805 493 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 MYO7AQ13402 2215 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 FIBCD1Q8N539 461 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 ZCCHC9Q8N567 271 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TAB3Q8N5C8 712 aaPredicted RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 SP7Q8TDD2 431 aaPredicted RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 UBLCP1Q8WVY7 318 aaPredicted RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 CEP295NLQ96MC4 621 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 UBE2OQ9C0C9 1292 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 KLC2Q9H0B6 622 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TLR8Q9NR97 1041 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 CHD7Q9P2D1 2997 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 PRKAG2Q9UGJ0 569 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 ATG2AQ2TAZ0 1938 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 LCHNA4D1U4 455 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CFAP69A5D8W1 941 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 SYN1P17600 705 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 PSEN1P49768 467 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CBX1P83916 185 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 MORF4L2Q15014 288 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 PRKD1Q15139 912 aaPredicted RBP17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 LRIG3Q6UXM1 1119 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 C14orf80Q86SX3 495 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CCDC25Q86WR0 208 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 NAT8LQ8N9F0 302 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 HERVK_113Q902F9 699 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 LGMNQ99538 433 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 PABPC3Q9H361 631 aaKnown RBP17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CCSER2Q9H7U1 834 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 MAGED2Q9UNF1 606 aaPredicted RBP17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 YIPF1Q9Y548 306 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CHD9Q3L8U1 2897 aa17.71■□□□□ 0.43
FRMD4A-202ENST00000342409 CARNS1A5YM72 827 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 TEX28O15482 410 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 TMEM63AO94886 807 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 IGLV3-27P01718 113 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 HOXC13P31276 330 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 ZNF135P52742 658 aaPredicted RBP17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 PIK3R6Q5UE93 754 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 HERC6Q8IVU3 1022 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 GPR65Q8IYL9 337 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 EPAS1Q99814 870 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 CYP4F11Q9HBI6 524 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 MED4Q9NPJ6 270 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 FNIP2Q9P278 1114 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 SHOC2Q9UQ13 582 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 PCDHB12Q9Y5F1 795 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 HS3ST4Q9Y661 456 aa17.7■□□□□ 0.42
FRMD4A-202ENST00000342409 HACD1B0YJ81 288 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 SHBGP04278 402 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 TBX4P57082 545 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 ZNF844Q08AG5 666 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 TRIP4Q15650 581 aaPredicted RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 PSRC1Q6PGN9 363 aaPredicted RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 ZNF683Q8IZ20 524 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 KLHL23Q8NBE8 558 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 CCDC110Q8TBZ0 833 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 PRDM12Q9H4Q4 367 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 INSL6Q9Y581 213 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 RIPK2O43353 540 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 GCATO75600 419 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 MOCS2O96007 188 aaPredicted RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 CTSAP10619 480 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 EPHB2P29323 1055 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 NRG1Q02297 640 aaPredicted RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 KCNJ11Q14654 390 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 C10orf120Q5SQS8 335 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 SNX30Q5VWJ9 437 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 RELL1Q8IUW5 271 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 PPIL6Q8IXY8 311 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms