RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 RBL1P28749 1068 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 MDM1Q8TC05 714 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 CORO1BQ9BR76 489 aa20.09■□□□□ 0.81
SEMA6C-201ENST00000341697 COL1A1P02452 1464 aaPredicted RBP20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 SNED1Q8TER0 1413 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 LRP6O75581 1613 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 PCDH8O95206 1070 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 IRF2BP2Q7Z5L9 587 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 MBOAT7Q96N66 472 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 GPAMQ9HCL2 828 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 CNGB3Q9NQW8 809 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 FRMD3A2A2Y4 597 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 H2AFYO75367 372 aaKnown RBP20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 MBTD1Q05BQ5 628 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 TPGS1Q6ZTW0 290 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 PIP4K2CQ8TBX8 421 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 CSGALNACT1Q8TDX6 532 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 SEMA4DQ92854 862 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 PSD3Q9NYI0 1048 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 SPG21Q9NZD8 308 aa20.08■□□□□ 0.81
SEMA6C-201ENST00000341697 ATP5BP06576 529 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 RBP1P09455 135 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 IGFBP4P22692 258 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 RPL21P46778 160 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 DSG4Q86SJ6 1040 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 CAVIN3Q969G5 261 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 SNRNP25Q9BV90 132 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 CLDN5O00501 218 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 MRPS5P82675 430 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 RAP1GAP2Q684P5 730 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 FAM84AQ96KN4 292 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 POLR1EQ9GZS1 481 aaKnown RBP20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 CHST7Q9NS84 486 aa20.08■□□□□ 0.8
SEMA6C-201ENST00000341697 SYCE1LA8MT33 242 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 PECAM1P16284 738 aaPredicted RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 BCL2L1Q07817 233 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 TBL1YQ9BQ87 522 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 C2orf49Q9BVC5 232 aaPredicted RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 STN1Q9H668 368 aaKnown RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 GOLGA2P5Q9HBQ8 144 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 PGAM1P18669 254 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 POLR2EP19388 210 aaKnown RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 SMARCB1Q12824 385 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 DNAJC3Q13217 504 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 ARID3BQ8IVW6 561 aaPredicted RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 TEX12Q9BXU0 123 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 SEMA4AQ9H3S1 761 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 L1RE1Q9UN81 338 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 MRPS23Q9Y3D9 190 aaKnown RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 GNRH1P01148 92 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 LAG3P18627 525 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 IL10P22301 178 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 DNAL1Q4LDG9 190 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 SLC45A4Q5BKX6 768 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 CREG2Q8IUH2 290 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 CMTM5Q96DZ9 223 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 YIPF2Q9BWQ6 316 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 RUBCNLQ9H714 662 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 TMBIM4Q9HC24 238 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 MGAT1P26572 445 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 CHKAP35790 457 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 IRF2BP1Q8IU81 584 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 FAM136AQ96C01 138 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 SEC16BQ96JE7 1060 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 FUT8Q9BYC5 575 aa20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
SEMA6C-201ENST00000341697 GLRBP48167 497 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 ILF2Q12905 390 aaKnown RBP20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 ERP27Q96DN0 273 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 CD151P48509 253 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 DDR2Q16832 855 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 PARP6Q2NL67 630 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 WDR27A2RRH5 827 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 CAND2O75155 1236 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 C4BPAP04003 597 aaKnown RBP20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 ENO3P13929 434 aaPredicted RBP20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 MATKP42679 507 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 DPYSL3Q14195 570 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 RFWD2Q8NHY2 731 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 SPPL2BQ8TCT7 592 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 LHX5Q9H2C1 402 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 YY1AP1Q9H869 796 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 DAB1O75553 588 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 KRT16P08779 473 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 OR1D2P34982 312 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 SPANXN3Q5MJ09 141 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 SETD3Q86TU7 594 aaPredicted RBP20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 TEKT4Q8WW24 435 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 KREMEN1Q96MU8 473 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 SCOCQ9UIL1 159 aa20.06■□□□□ 0.8
SEMA6C-201ENST00000341697 GPR25O00155 361 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 PBLDP30039 288 aaPredicted RBP20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 KDM7AQ6ZMT4 941 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 VPS37AQ8NEZ2 397 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 FAR2Q96K12 515 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 PRPF18Q99633 342 aaKnown RBP20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 CXCL14O95715 111 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 ERBB2P04626 1255 aa20.05■□□□□ 0.8
SEMA6C-201ENST00000341697 SDHAF4Q5VUM1 108 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms