RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 SYT12Q8IV01 421 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 ABCA7Q8IZY2 2146 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 DEFB119Q8N690 84 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 NOX5Q96PH1 765 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 SLC6A17Q9H1V8 727 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 PRDM16Q9HAZ2 1276 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 ABCB8Q9NUT2 735 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 STIM2Q9P246 746 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 AJAP1Q9UKB5 411 aaPredicted RBP20.94■□□□□ 0.94
SYNE2-201ENST00000341472 CYP8B1Q9UNU6 501 aa20.94■□□□□ 0.94
SYNE2-201ENST00000341472 MYO18AQ92614 2054 aaKnown RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 TM4SF5O14894 197 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 GLI1P08151 1106 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 PABPC1P11940 636 aaKnown RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 SLC6A4P31645 630 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 CLCN1P35523 988 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 SGSHP51688 502 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 IRX4P78413 519 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 TAF5Q15542 800 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 ZC3H12AQ5D1E8 599 aaKnown RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 NADSYN1Q6IA69 706 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 SERPINA13PQ6UXR4 307 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 CHST9Q7L1S5 443 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 KIAA0907Q7Z7F0 614 aaPredicted RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 METTL3Q86U44 580 aaKnown RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 TMPRSS6Q8IU80 811 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 PASD1Q8IV76 773 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 FAM71AQ8IYT1 594 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 ZNF557Q8N988 423 aaPredicted RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 ENOX1Q8TC92 643 aaKnown RBP20.93■□□□□ 0.94
SYNE2-201ENST00000341472 GGA2Q9UJY4 613 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 DNAH14Q0VDD8 3507 aa20.93■□□□□ 0.94
SYNE2-201ENST00000341472 PATE3B3GLJ2 98 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 NDUFS2O75306 463 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 TRUB2O95900 331 aaKnown RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 ATP5BP06576 529 aaKnown RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 EEF1GP26641 437 aaKnown RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 CDK17Q00537 523 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 KCNMA1Q12791 1236 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 DCAF6Q58WW2 860 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 TCP11X2Q5H9J9 407 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 PPM1JQ5JR12 505 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 EFHC1Q5JVL4 640 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 KLHDC7AQ5VTJ3 777 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 DPY19L2P1Q6NXN4 242 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 ADIPOR2Q86V24 386 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 SLC47A2Q86VL8 602 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 CCDC117Q8IWD4 279 aaPredicted RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 AHI1Q8N157 1196 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 HJURPQ8NCD3 748 aaPredicted RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 CPXM1Q96SM3 734 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 EDEM2Q9BV94 578 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 MKRN2Q9H000 416 aaKnown RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 ITM2CQ9NQX7 267 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 TMEM74BQ9NUR3 256 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 TJP2Q9UDY2 1190 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 SLC12A6Q9UHW9 1150 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 EVLQ9UI08 416 aaPredicted RBP20.92■□□□□ 0.94
SYNE2-201ENST00000341472 PILRBQ9UKJ0 227 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 NFE2L3Q9Y4A8 694 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 MYO16Q9Y6X6 1858 aa20.92■□□□□ 0.94
SYNE2-201ENST00000341472 TYW5A2RUC4 315 aaKnown RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 C4orf47A7E2U8 309 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 MOCS2O96007 188 aaPredicted RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 APOEP02649 317 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 EPHX1P07099 455 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 POLR2EP19388 210 aaKnown RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 ITPKAP23677 461 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 PRKCHP24723 683 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 ZNF33AQ06730 810 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 RAPGEF1Q13905 1077 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 DRAP1Q14919 205 aaPredicted RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 GON4LQ3T8J9 2241 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 FNDC3BQ53EP0 1204 aaKnown RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 MS4A13Q5J8X5 152 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 MBLAC2Q68D91 279 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 OR6B2Q6IFH4 312 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 C11orf57Q6ZUT1 292 aaPredicted RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 FIBINQ8TAL6 211 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 GPT2Q8TD30 523 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 CYB5D2Q8WUJ1 264 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 PRCCQ92733 491 aaPredicted RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 SIPA1Q96FS4 1042 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 NUCKS1Q9H1E3 243 aaKnown RBP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 PDCL3Q9H2J4 239 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 SYNCQ9H7C4 482 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.91■□□□□ 0.94
SYNE2-201ENST00000341472 ASNSD1Q9NWL6 643 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 CEP83Q9Y592 693 aa20.91■□□□□ 0.94
SYNE2-201ENST00000341472 SPAG17Q6Q759 2223 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 LNP1A1A4G5 178 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 GOLGA6L22H0YM25 854 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 DLDP09622 509 aaKnown RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 PNMA6AP0CW24 399 aaPredicted RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 CD70P32970 193 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 HOXD12P35452 270 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 RPS24P62847 133 aaKnown RBP20.9■□□□□ 0.94
SYNE2-201ENST00000341472 TRIM61Q5EBN2 209 aa20.9■□□□□ 0.94
SYNE2-201ENST00000341472 MFN1Q8IWA4 741 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms