RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 COPAP53621 1224 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 LRMPQ12912 555 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 SUZ12Q15022 739 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 MPP7Q5T2T1 576 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 NUGGCQ68CJ6 796 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 LCLAT1Q6UWP7 414 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 NAXDQ8IW45 347 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 FMR1NBQ8N0W7 255 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 AHI1Q8N157 1196 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 CHCHD4Q8N4Q1 142 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 SORCS1Q8WY21 1168 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 ZCCHC14Q8WYQ9 949 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 IRGQQ8WZA9 623 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 NDRG1Q92597 394 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 P2RY11Q96G91 374 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 STOML2Q9UJZ1 356 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 CLEC4EQ9ULY5 219 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 PCDHB4Q9Y5E5 795 aa13.61□□□□□ -0.23
NECTIN1-203ENST00000341398 FAM221BA6H8Z2 402 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 O00370 1275 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 IRAK2O43187 625 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 GJB3O75712 270 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 DNTTP04053 509 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 ZNF883P0CG24 379 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 PRKCHP24723 683 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 DAOAP59103 153 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 ZBTB16Q05516 673 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 TEAD4Q15561 434 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 CNGA2Q16280 664 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 TMEM215Q68D42 235 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 SETD7Q8WTS6 366 aaKnown RBP13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 SNX19Q92543 992 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 DHTKD1Q96HY7 919 aaPredicted RBP13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 CEP63Q96MT8 703 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 GAREM1Q9H706 876 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 ABCB8Q9NUT2 735 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 EIF2B4Q9UI10 523 aaKnown RBP13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 GGA2Q9UJY4 613 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 KLK13Q9UKR3 277 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 SPEGQ15772 3267 aa13.6□□□□□ -0.23
NECTIN1-203ENST00000341398 PMM2O15305 246 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 FBXO21O94952 628 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 DLDP09622 509 aaKnown RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 PABPC1P11940 636 aaKnown RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 HLA-FP30511 346 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 FMO5P49326 533 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 AFF3P51826 1226 aaKnown RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 ST8SIA6P61647 398 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 FAM193AP78312 1265 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 MBLAC2Q68D91 279 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 MSANTD2Q6P1R3 559 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 BHLHA9Q7RTU4 235 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 RAB44Q7Z6P3 723 aaPredicted RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 PPM1KQ8N3J5 372 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 RBBP8NLQ8NC74 664 aaPredicted RBP13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 AZIN2Q96A70 460 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 CAMK1GQ96NX5 476 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 TMEM245Q9H330 911 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 TM7SF3Q9NS93 570 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 NCKAP1Q9Y2A7 1128 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 NUMA1Q14980 2115 aa13.59□□□□□ -0.23
NECTIN1-203ENST00000341398 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 P4HA2O15460 535 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 ACSL4O60488 711 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 TBL1XO60907 577 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 LTFP02788 710 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 HLA-EP13747 358 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 HOXB3P14651 431 aaPredicted RBP13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 RGS7P49802 495 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 TBX4P57082 545 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 RING1Q06587 406 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 PKDCCQ504Y2 493 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 PIK3R6Q5UE93 754 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 PMF1Q6P1K2 205 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 KIAA0907Q7Z7F0 614 aaPredicted RBP13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 CACUL1Q86Y37 369 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 SPATA20Q8TB22 786 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 ADAMTS14Q8WXS8 1223 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 CDC6Q99741 560 aa13.58□□□□□ -0.23
NECTIN1-203ENST00000341398 TRIM62Q9BVG3 475 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms