RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 XPO6Q96QU8 1125 aaKnown RBP16.01■□□□□ 0.15
VAPA-201ENST00000340541 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 CLEC4EQ9ULY5 219 aa16.01■□□□□ 0.15
VAPA-201ENST00000340541 TPRP12270 2363 aaKnown RBP16■□□□□ 0.15
VAPA-201ENST00000340541 A0A1W2PQC6 194 aa16■□□□□ 0.15
VAPA-201ENST00000340541 TBC1D3BA6NDS4 549 aa16■□□□□ 0.15
VAPA-201ENST00000340541 PRRT4C9JH25 899 aa16■□□□□ 0.15
VAPA-201ENST00000340541 GRAP2O75791 330 aa16■□□□□ 0.15
VAPA-201ENST00000340541 TRUB2O95900 331 aaKnown RBP16■□□□□ 0.15
VAPA-201ENST00000340541 SLC6A4P31645 630 aa16■□□□□ 0.15
VAPA-201ENST00000340541 SNX16P57768 344 aa16■□□□□ 0.15
VAPA-201ENST00000340541 MRPS21P82921 87 aaKnown RBP16■□□□□ 0.15
VAPA-201ENST00000340541 C2CD6Q53TS8 623 aa16■□□□□ 0.15
VAPA-201ENST00000340541 DCAF6Q58WW2 860 aa16■□□□□ 0.15
VAPA-201ENST00000340541 OTUD1Q5VV17 481 aaPredicted RBP16■□□□□ 0.15
VAPA-201ENST00000340541 NAA35Q5VZE5 725 aa16■□□□□ 0.15
VAPA-201ENST00000340541 RNF43Q68DV7 783 aa16■□□□□ 0.15
VAPA-201ENST00000340541 ERICH1Q86X53 443 aa16■□□□□ 0.15
VAPA-201ENST00000340541 XYLT1Q86Y38 959 aa16■□□□□ 0.15
VAPA-201ENST00000340541 ZDHHC17Q8IUH5 632 aa16■□□□□ 0.15
VAPA-201ENST00000340541 UNC45BQ8IWX7 931 aa16■□□□□ 0.15
VAPA-201ENST00000340541 IL17RCQ8NAC3 791 aa16■□□□□ 0.15
VAPA-201ENST00000340541 CPA5Q8WXQ8 436 aa16■□□□□ 0.15
VAPA-201ENST00000340541 C18orf8Q96DM3 657 aa16■□□□□ 0.15
VAPA-201ENST00000340541 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
VAPA-201ENST00000340541 DUSP15Q9H1R2 295 aaPredicted RBP16■□□□□ 0.15
VAPA-201ENST00000340541 SYNCQ9H7C4 482 aa16■□□□□ 0.15
VAPA-201ENST00000340541 SLC27A6Q9Y2P4 619 aa16■□□□□ 0.15
VAPA-201ENST00000340541 EML5Q05BV3 1969 aa16■□□□□ 0.15
VAPA-201ENST00000340541 ACACBO00763 2458 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 GOLGA6L7A0A1B0GV03 622 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 ACSL4O60488 711 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 DAB1O75553 588 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 UNGP13051 313 aaPredicted RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 HNRNPLP14866 589 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■□□□□ 10.3
VAPA-201ENST00000340541 HOXD9P28356 352 aaPredicted RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 SCNN1AP37088 669 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 DGKGP49619 791 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 SGSHP51688 502 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 HSF5Q4G112 596 aaPredicted RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 MPPE1Q53F39 396 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 USP39Q53GS9 565 aaKnown RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 C10orf76Q5T2E6 689 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 ALLCQ8N6M5 410 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 OLIG1Q8TAK6 271 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 MYEOVQ96EZ4 313 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 HHIPQ96QV1 700 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 ADAM33Q9BZ11 813 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 TTYH3Q9C0H2 523 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 ZDHHC4Q9NPG8 344 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 XPO7Q9UIA9 1087 aaKnown RBP15.99■□□□□ 0.15
VAPA-201ENST00000340541 MMP17Q9ULZ9 603 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 STARD13Q9Y3M8 1113 aa15.99■□□□□ 0.15
VAPA-201ENST00000340541 SDK1Q7Z5N4 2213 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 SGK1O00141 431 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 TSPAN3O60637 253 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 ADAM23O75077 832 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 MMP8P22894 467 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 TIE1P35590 1138 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 MPLP40238 635 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 PBX1P40424 430 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 SLC11A2P49281 568 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 ZNF445P59923 1031 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 CDK17Q00537 523 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 FANCCQ00597 558 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 ARID5AQ03989 594 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 PTP4A2Q12974 167 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 PREPLQ4J6C6 727 aaPredicted RBP15.98■□□□□ 0.15
VAPA-201ENST00000340541 ZC3H12AQ5D1E8 599 aaKnown RBP15.98■□□□□ 0.15
VAPA-201ENST00000340541 STPG1Q5TH74 334 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 PIK3R6Q5UE93 754 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 TRNP1Q6NT89 227 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 RFWD3Q6PCD5 774 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 IRF2BP2Q7Z5L9 587 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 TXNDC5Q8NBS9 432 aaKnown RBP15.98■□□□□ 0.15
VAPA-201ENST00000340541 KCNV2Q8TDN2 545 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 DDI1Q8WTU0 396 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 NT5C3BQ969T7 300 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 PRICKLE1Q96MT3 831 aaPredicted RBP15.98■□□□□ 0.15
VAPA-201ENST00000340541 SYT11Q9BT88 431 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
VAPA-201ENST00000340541 MYO6Q9UM54 1294 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 EPG5Q9HCE0 2579 aa15.98■□□□□ 0.15
VAPA-201ENST00000340541 BCLAF3A2AJT9 711 aaKnown RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 KCNU1A8MYU2 1149 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 KLF8O95600 359 aaPredicted RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 SERPINC1P01008 464 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 CYBBP04839 570 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
VAPA-201ENST00000340541 NOS2P35228 1153 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 MATKP42679 507 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 DGKEP52429 567 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 CRY1Q16526 586 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
VAPA-201ENST00000340541 EGFLAMQ63HQ2 1017 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms