RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 R4GN57 208 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 ITIH6Q6UXX5 1313 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 ALDH1A2O94788 518 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 APBB3O95704 486 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 HOXD9P28356 352 aaPredicted RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 MESP2Q0VG99 397 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 EIF4HQ15056 248 aaKnown RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 BRMS1LQ5PSV4 323 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 RABGAP1LQ5R372 815 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 PIK3R6Q5UE93 754 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 DNAJC24Q6P3W2 148 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 LONP2Q86WA8 852 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 CCDC33Q8N5R6 958 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 ALLCQ8N6M5 410 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 TXNDC5Q8NBS9 432 aaKnown RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 TSTD1Q8NFU3 115 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 WFIKKN2Q8TEU8 576 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 NKD2Q969F2 451 aaPredicted RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 NPY6RQ99463 290 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 HAUS4Q9H6D7 363 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 FBXO10Q9UK96 956 aa19.89■□□□□ 0.77
SYNE4-202ENST00000340477 LUC7L2Q9Y383 392 aaKnown RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 BZW2Q9Y6E2 419 aaKnown RBP19.89■□□□□ 0.77
SYNE4-202ENST00000340477 GOLGA6L7A0A1B0GV03 622 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 K7ESF4 209 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 TRIM24O15164 1050 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 ZBTB24O43167 697 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 CISD3P0C7P0 127 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 TDGF1P13385 188 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 TACR2P21452 398 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 HOXA6P31267 233 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 SDC4P31431 198 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 SLC6A4P31645 630 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 PRKCIP41743 596 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 KIR2DL1P43626 348 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 DGKEP52429 567 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 GSCP56915 257 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 ZBED6P86452 979 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 CDH18Q13634 790 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 TRIM14Q14142 442 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 MS4A13Q5J8X5 152 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 TTC39BQ5VTQ0 682 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 RAP1GAP2Q684P5 730 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 HEATR6Q6AI08 1181 aaKnown RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 NADSYN1Q6IA69 706 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 MON1BQ7L1V2 547 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 MFN1Q8IWA4 741 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 SFTPA1Q8IWL2 248 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 LGI2Q8N0V4 545 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 IL17RCQ8NAC3 791 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 CPLX3Q8WVH0 158 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 SYN2Q92777 582 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 PGAP3Q96FM1 320 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 HHIPQ96QV1 700 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 WDCPQ9H6R7 721 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 POLMQ9NP87 494 aaPredicted RBP19.88■□□□□ 0.77
SYNE4-202ENST00000340477 STIM2Q9P246 746 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 STARD13Q9Y3M8 1113 aa19.88■□□□□ 0.77
SYNE4-202ENST00000340477 NPC1O15118 1278 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 KRT3P12035 628 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 RDXP35241 583 aaKnown RBP19.87■□□□□ 0.77
SYNE4-202ENST00000340477 FLT3P36888 993 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 FNTBP49356 437 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 ACBD5Q5T8D3 534 aaPredicted RBP19.87■□□□□ 0.77
SYNE4-202ENST00000340477 CHPFQ8IZ52 775 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 ZBTB44Q8NCP5 570 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 C3orf20Q8ND61 904 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 NELL1Q92832 810 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 TBCBQ99426 244 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 CIPCQ9C0C6 399 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 PIGVQ9NUD9 493 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 C2orf42Q9NWW7 574 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 TMEM59LQ9UK28 342 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 CAPN11Q9UMQ6 739 aa19.87■□□□□ 0.77
SYNE4-202ENST00000340477 CCDC163A0A0D9SF12 145 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 PROB1E7EW31 1015 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 GFRA2O00451 464 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 TIMM44O43615 452 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 PDGFRAP16234 1089 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 NTSR1P30989 418 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 CNR2P34972 360 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 EIF4EBP2Q13542 120 aaPredicted RBP19.86■□□□□ 0.77
SYNE4-202ENST00000340477 SPECC1LQ69YQ0 1117 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 PHLDB2Q86SQ0 1253 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 AHI1Q8N157 1196 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 CARNMT1Q8N4J0 409 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 EMC1Q8N766 993 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 NT5C3BQ969T7 300 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 TRIM11Q96F44 468 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 VCPIP1Q96JH7 1222 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 CFAP57Q96MR6 1250 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 PRICKLE1Q96MT3 831 aaPredicted RBP19.86■□□□□ 0.77
SYNE4-202ENST00000340477 GGA2Q9UJY4 613 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 RAB23Q9ULC3 237 aa19.86■□□□□ 0.77
SYNE4-202ENST00000340477 TMCO5BA8MYB1 307 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 PRRT4C9JH25 899 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 H0Y626 953 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 SERPING1P05155 500 aa19.85■□□□□ 0.77
SYNE4-202ENST00000340477 HOXB2P14652 356 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms