RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 EEF2KMTQ96G04 330 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 ULBP1Q9BZM6 244 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 PCED1AQ9H1Q7 454 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 TM7SF3Q9NS93 570 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 OLA1Q9NTK5 396 aaKnown RBP16.33■□□□□ 0.2
LINC01116-202ENST00000339037 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 CKAP5Q14008 2032 aa16.33■□□□□ 0.2
LINC01116-202ENST00000339037 STX10O60499 249 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 HLA-EP13747 358 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 AFF3P51826 1226 aaKnown RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 ZNF445P59923 1031 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 CAMK2GQ13555 558 aaPredicted RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 TRIP4Q15650 581 aaPredicted RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 GOLGA7BQ2TAP0 167 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 HLA-BQ31612 363 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 FNDC3BQ53EP0 1204 aaKnown RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 PM20D1Q6GTS8 502 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 CCNI2Q6ZMN8 369 aaPredicted RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 C1orf216Q8TAB5 229 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
LINC01116-202ENST00000339037 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 CABIN1Q9Y6J0 2220 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 BPTFQ12830 3046 aa16.32■□□□□ 0.2
LINC01116-202ENST00000339037 A0A1W2PQ27 194 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 A0A1W2PQ64 194 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 XPO1O14980 1071 aaKnown RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 TSPAN3O60637 253 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 EPB41P11171 864 aaKnown RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 HLA-FP30511 346 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 BCAT1P54687 386 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 BNC1Q01954 994 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 SLCO6A1Q86UG4 719 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 WFIKKN2Q8TEU8 576 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 NDRG1Q92597 394 aaKnown RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 LHX5Q9H2C1 402 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 TMEM245Q9H330 911 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 HBS1LQ9Y450 684 aaKnown RBP16.31■□□□□ 0.2
LINC01116-202ENST00000339037 PCDHGB2Q9Y5G2 931 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
LINC01116-202ENST00000339037 GCN1Q92616 2671 aaKnown RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 A0A1B0GVT2 93 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 TULP2O00295 520 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 FLRT2O43155 660 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 ACSL1P33121 698 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 CSNK1EP49674 416 aaKnown RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 PDE4CQ08493 712 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 ACAP1Q15027 740 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 SIX6OS1Q8N1H7 587 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 ZNF366Q8N895 744 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 BAHD1Q8TBE0 780 aaPredicted RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 CYB5D2Q8WUJ1 264 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 EDEM1Q92611 657 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 TATDN2Q93075 761 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 TMA16Q96EY4 203 aaKnown RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 CDC6Q99741 560 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 C6orf106Q9H6K1 298 aaPredicted RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 ABCB8Q9NUT2 735 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 KIAA1522Q9P206 1035 aaPredicted RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 SFMBT1Q9UHJ3 866 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 GGA2Q9UJY4 613 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.3■□□□□ 0.2
LINC01116-202ENST00000339037 GPSM3Q9Y4H4 160 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 SLCO1B1Q9Y6L6 691 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 NUMA1Q14980 2115 aa16.3■□□□□ 0.2
LINC01116-202ENST00000339037 KALRNO60229 2985 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 CETN3O15182 167 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 LATS1O95835 1130 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 CD19P15391 556 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 ZBTB16Q05516 673 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 TEAD4Q15561 434 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 KIF19Q2TAC6 998 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 SGO2Q562F6 1265 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 DCAF17Q5H9S7 520 aaPredicted RBP16.29■□□□□ 0.2
LINC01116-202ENST00000339037 ADGRF1Q5T601 910 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 BSPRYQ5W0U4 402 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 CHST9Q7L1S5 443 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 ADIPOR2Q86V24 386 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
LINC01116-202ENST00000339037 AHI1Q8N157 1196 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 FBRSQ9HAH7 460 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 PCDHGA4Q9Y5G9 962 aa16.29■□□□□ 0.2
LINC01116-202ENST00000339037 YJEFN3A6XGL0 299 aa16.28■□□□□ 0.2
LINC01116-202ENST00000339037 E7ENQ6 273 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms