RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 A0A1W2PPM1 405 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 GOLGA8SH3BPF8 625 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 M0QZ92 97 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 BIRC5O15392 142 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 PRPSAP2O60256 369 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 HAUS5O94927 633 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 SNRPAP09012 282 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 HARSP12081 509 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 KCNA5P22460 613 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 CTNNB1P35222 781 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 BMPR1AP36894 532 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 YWHAZP63104 245 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 RBP5P82980 135 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 PPARDQ03181 441 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 E2F5Q15329 346 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 LEXMQ3ZCV2 418 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 TCEAL5Q5H9L2 206 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 EEF1DP3Q658K8 133 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 ARHGAP17Q68EM7 881 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 RTN4RL1Q86UN2 441 aaPredicted RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 UNC93AQ86WB7 457 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 CCNJLQ8IV13 435 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 ARHGAP24Q8N264 748 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 FAM13CQ8NE31 585 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 CLP1Q92989 425 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 ZNF689Q96CS4 500 aaPredicted RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 PTCD3Q96EY7 689 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 TBC1D10AQ9BXI6 508 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 DNAI2Q9GZS0 605 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 FAM96AQ9H5X1 160 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 DCLRE1BQ9H816 532 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 ZWILCHQ9H900 591 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 POPDC2Q9HBU9 364 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 XAB2Q9HCS7 855 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 SLCO1B3Q9NPD5 702 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
RTN3-201ENST00000338850 PADI3Q9ULW8 664 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 TTLL3Q9Y4R7 772 aa11.14□□□□□ -0.63
RTN3-201ENST00000338850 TTC3P53804 2025 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 A8MXQ7 604 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 HACD1B0YJ81 288 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 M0QYV0 167 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 APOL1O14791 398 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 GCATO75600 419 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 DGKIO75912 1065 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 KRT38O76015 456 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 RB1P06400 928 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 NFICP08651 508 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 STAG3L1P0CL83 205 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 TPBGLP0DKB5 382 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 CXCL8P10145 99 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 FGFR1P11362 822 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 COL9A1P20849 921 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ELK3P41970 407 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 CDH6P55285 790 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 BASP1P80723 227 aaKnown RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 BTG3Q14201 252 aaPredicted RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 DPYSL2Q16555 572 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 SEZ6Q53EL9 994 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ANKRD20A2Q5SQ80 823 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 ANKRD20A1Q5TYW2 823 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ANKRD20A3Q5VUR7 823 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ATG16L1Q676U5 607 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 STEAP4Q687X5 459 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ZNF410Q86VK4 478 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 LRRC6Q86X45 466 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 ANKMY2Q8IV38 441 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 NME8Q8N427 588 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 KIF2BQ8N4N8 673 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 STON2Q8WXE9 905 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 PEBP4Q96S96 227 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 PAIP2Q9BPZ3 127 aaKnown RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 C11orf84Q9BUA3 381 aaPredicted RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 NT5C1AQ9BXI3 368 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 NSUN3Q9H649 340 aaKnown RBP11.13□□□□□ -0.63
RTN3-201ENST00000338850 SIRPGQ9P1W8 387 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 DNAJB4Q9UDY4 337 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 RWDD3Q9Y3V2 267 aa11.13□□□□□ -0.63
RTN3-201ENST00000338850 FAM159BA6NKW6 160 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 LACTBL1A8MY62 500 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 F8W8V4 182 aa11.12□□□□□ -0.63
RTN3-201ENST00000338850 INO80B-WBP1J3KQ70 363 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms